RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DAGLBQ8NCG7 672 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 PYM1Q9BRP8 204 aaKnown RBP19■□□□□ 0.63
CCDC43-202ENST00000457422 PCDHA4Q9UN74 947 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 QSER1Q2KHR3 1735 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 M0R2N6 131 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 PPEF1O14829 653 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 ZNF18P17022 549 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 CDK8P49336 464 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 HSP90AA2PQ14568 343 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 ARL6IP4Q66PJ3 421 aaKnown RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 GALNT17Q6IS24 598 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 NYAP1Q6ZVC0 841 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 SP8Q8IXZ3 490 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 DPF2Q92785 391 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 RIOK3O14730 519 aaKnown RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 TXNRD1Q16881 649 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 VSTM4Q8IW00 320 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 CCAR2Q8N163 923 aaKnown RBP18.99■□□□□ 0.63
CCDC43-202ENST00000457422 CCDC148Q8NFR7 591 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 NEDD1Q8NHV4 660 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 PAGE5Q96GU1 130 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 STX8Q9UNK0 236 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 MTMR7Q9Y216 660 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 PAXBP1Q9Y5B6 917 aa18.99■□□□□ 0.63
CCDC43-202ENST00000457422 CYTH3O43739 400 aa18.98■□□□□ 0.63
CCDC43-202ENST00000457422 RBM10P98175 930 aaKnown RBP18.98■□□□□ 0.63
CCDC43-202ENST00000457422 FMR1Q06787 632 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC43-202ENST00000457422 CFAP100Q494V2 611 aa18.98■□□□□ 0.63
CCDC43-202ENST00000457422 PROM2Q8N271 834 aa18.98■□□□□ 0.63
CCDC43-202ENST00000457422 GSDMAQ96QA5 445 aa18.98■□□□□ 0.63
CCDC43-202ENST00000457422 USP27XA6NNY8 438 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 NRDCO43847 1150 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 NOVP48745 357 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 DPYDQ12882 1025 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 E2F4Q16254 413 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 TYW1BQ6NUM6 668 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 MAP7D2Q96T17 732 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 EYA3Q99504 573 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 SPZ1Q9BXG8 430 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 SUGT1Q9Y2Z0 365 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 NFE2L3Q9Y4A8 694 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 MCM7P33993 719 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 C4orf32Q8N8J7 132 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 BARHL2Q9NY43 387 aa18.97■□□□□ 0.63
CCDC43-202ENST00000457422 AFMP43652 599 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 WWC2Q6AWC2 1192 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 RASGRP2Q7LDG7 609 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 MTERF4Q7Z6M4 381 aaKnown RBP18.96■□□□□ 0.63
CCDC43-202ENST00000457422 RASGRP4Q8TDF6 673 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 MED15Q96RN5 788 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 COA1Q9GZY4 146 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 PDCL3Q9H2J4 239 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 ATP6V0A2Q9Y487 856 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 PSDA5PKW4 1024 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-202ENST00000457422 CTIFO43310 598 aaKnown RBP18.96■□□□□ 0.63
CCDC43-202ENST00000457422 SMARCA1P28370 1054 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 LONP1P36776 959 aaKnown RBP18.96■□□□□ 0.63
CCDC43-202ENST00000457422 GTF2IP78347 998 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 IL17AQ16552 155 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 TRMT44Q8IYL2 757 aaKnown RBP18.96■□□□□ 0.63
CCDC43-202ENST00000457422 IQUBQ8NA54 791 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 CCDC112Q8NEF3 446 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 INTS13Q9NVM9 706 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
CCDC43-202ENST00000457422 STXBP3O00186 592 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 RIMBP2O15034 1052 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 CASP1P29466 404 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 PTPN14Q15678 1187 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 CEP135Q66GS9 1140 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 HEATR3Q7Z4Q2 680 aa18.95■□□□□ 0.62
CCDC43-202ENST00000457422 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 GOLGA8HP0CJ92 632 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 E4F1Q66K89 784 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-202ENST00000457422 TSC1Q92574 1164 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 TMX1Q9H3N1 280 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 PCDHA6Q9UN73 950 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 PCDHA8Q9Y5H6 950 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 CCDC194A0A1B0GVG4 234 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 KLRF2D3W0D1 207 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 KIF2AO00139 706 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-202ENST00000457422 TOP1P11387 765 aaKnown RBP18.94■□□□□ 0.62
CCDC43-202ENST00000457422 CUL4BQ13620 913 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 PDXDC2PQ6P474 469 aa18.94■□□□□ 0.62
CCDC43-202ENST00000457422 MYH8P13535 1937 aa18.93■□□□□ 0.62
CCDC43-202ENST00000457422 TRMT1Q9NXH9 659 aaKnown RBP18.93■□□□□ 0.62
CCDC43-202ENST00000457422 PARP1P09874 1014 aaKnown RBP18.93■□□□□ 0.62
CCDC43-202ENST00000457422 TBX2Q13207 712 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-202ENST00000457422 ZMYND12Q9H0C1 365 aa18.93■□□□□ 0.62
CCDC43-202ENST00000457422 CPVLQ9H3G5 476 aa18.93■□□□□ 0.62
CCDC43-202ENST00000457422 LAD1O00515 517 aa18.92■□□□□ 0.62
CCDC43-202ENST00000457422 PTPN21Q16825 1174 aa18.92■□□□□ 0.62
CCDC43-202ENST00000457422 SPATA1Q5VX52 437 aa18.92■□□□□ 0.62
CCDC43-202ENST00000457422 NLGN1Q8N2Q7 840 aa18.92■□□□□ 0.62
CCDC43-202ENST00000457422 CCDC12Q8WUD4 166 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-202ENST00000457422 CEP95Q96GE4 821 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms