RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 TRIM55Q9BYV6 548 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 NEURL1BA8MQ27 555 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 CRCPO75575 148 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 EEF2P13639 858 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 PHBP35232 272 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 BBOF1Q8ND07 529 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 SEPT2Q15019 361 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 TRIM60Q495X7 471 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 RBM17Q96I25 401 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 DNM3Q9UQ16 869 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 DDB1Q16531 1140 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 AKNAD1Q5T1N1 836 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 METTL14Q9HCE5 456 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 CARMIL3Q8ND23 1372 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 I3L4J1 428 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 ZRANB2O95218 330 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 ITGA6P23229 1130 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 SPZ1Q9BXG8 430 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 SPOPO43791 374 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 TNFAIP3P21580 790 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 ME3Q16798 604 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 GSDMAQ96QA5 445 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 NEXMIFQ5QGS0 1516 aa9.39□□□□□ -0.91
NEDD4L-209ENST00000456986 RAB11FIP4Q86YS3 637 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 DIS3L2Q8IYB7 885 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 PLEKHF1Q96S99 279 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ZFYVE1Q9HBF4 777 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 NR1I2O75469 434 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 DCAF17Q5H9S7 520 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 WDR19Q8NEZ3 1342 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 CCDC151A5D8V7 595 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 SEMA3EO15041 775 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ATP2C2O75185 946 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 LMNB2Q03252 620 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 NEDD9Q14511 834 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ZNF365Q70YC5 407 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 PEX26Q7Z412 305 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 HYOU1Q9Y4L1 999 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ABCC12Q96J65 1359 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 OAS2P29728 719 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 HAUS1Q96CS2 278 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ARHGEF40Q8TER5 1519 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ADCY7P51828 1080 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ARID5AQ03989 594 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 SPATA1Q5VX52 437 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 FNBP1Q96RU3 617 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 XRCC5P13010 732 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 PCK1P35558 622 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ZSCAN26Q16670 478 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 BPIFA3Q9BQP9 254 aa9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 XPO4Q9C0E2 1151 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 XAB2Q9HCS7 855 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-209ENST00000456986 ARHGEF28Q8N1W1 1705 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 SMIM24O75264 130 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 SPATA5Q8NB90 893 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 CARD6Q9BX69 1037 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 B4E1Z4 1266 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 GIPC1O14908 333 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 PHF23Q9BUL5 403 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 MTMR6Q9Y217 621 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 KCNJ18B7U540 433 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 P4HA1P13674 534 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 STX17P56962 302 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 KCNJ12Q14500 433 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 NGLY1Q96IV0 654 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 KRT40Q6A162 431 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 CCDC117Q8IWD4 279 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 KAT6AQ92794 2004 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 GSPT1P15170 499 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 USP6P35125 1406 aa9.37□□□□□ -0.91
NEDD4L-209ENST00000456986 MORC3Q14149 939 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 KRT26Q7Z3Y9 468 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 CCHCR1Q8TD31 782 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 TSC1Q92574 1164 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 CABS1Q96KC9 395 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 FAM227BQ96M60 508 aa9.36□□□□□ -0.91
NEDD4L-209ENST00000456986 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms