RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 ZMYND8Q9ULU4 1186 aaPredicted RBP26.04■■□□□ 1.76
SEC22C-213ENST00000456222 ADAMTS5Q9UNA0 930 aa26.04■■□□□ 1.76
SEC22C-213ENST00000456222 SALL3Q9BXA9 1300 aa26.04■■□□□ 1.76
SEC22C-213ENST00000456222 FAM83BQ5T0W9 1011 aa26.03■■□□□ 1.76
SEC22C-213ENST00000456222 NCAPG2Q86XI2 1143 aa26.03■■□□□ 1.76
SEC22C-213ENST00000456222 NUP88Q99567 741 aaPredicted RBP26.03■■□□□ 1.76
SEC22C-213ENST00000456222 LAMA2P24043 3122 aaKnown RBP26.03■■□□□ 1.76
SEC22C-213ENST00000456222 RAD21O60216 631 aa26.02■■□□□ 1.76
SEC22C-213ENST00000456222 PRDM1O75626 825 aa26.02■■□□□ 1.76
SEC22C-213ENST00000456222 TDO2P48775 406 aa26.02■■□□□ 1.76
SEC22C-213ENST00000456222 DPP9Q86TI2 863 aa26.02■■□□□ 1.76
SEC22C-213ENST00000456222 MKNK2Q9HBH9 465 aa26.02■■□□□ 1.76
SEC22C-213ENST00000456222 STRNO43815 780 aa26.01■■□□□ 1.75
SEC22C-213ENST00000456222 CYBAP13498 195 aa26.01■■□□□ 1.75
SEC22C-213ENST00000456222 MX1P20591 662 aa26.01■■□□□ 1.75
SEC22C-213ENST00000456222 MROH8Q9H579 483 aa26.01■■□□□ 1.75
SEC22C-213ENST00000456222 GOPCQ9HD26 462 aa26.01■■□□□ 1.75
SEC22C-213ENST00000456222 DDX20Q9UHI6 824 aaKnown RBP26.01■■□□□ 1.75
SEC22C-213ENST00000456222 IGKV6D-41A0A0C4DH26 115 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 APPP05067 770 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 SYN1P17600 705 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 CNGA1P29973 690 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 IFNL3Q8IZI9 196 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 REPS2Q8NFH8 660 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 FSD1Q9BTV5 496 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 PPP1R9AQ9ULJ8 1098 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 PLXNA1Q9UIW2 1896 aa26■■□□□ 1.75
SEC22C-213ENST00000456222 SMCHD1A6NHR9 2005 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 PATL2C9JE40 543 aaKnown RBP25.99■■□□□ 1.75
SEC22C-213ENST00000456222 VWA5AO00534 786 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 ERC2O15083 957 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 FOXP2O15409 715 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 GNAT2P19087 354 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 LRRC26Q2I0M4 334 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 ZMYM1Q5SVZ6 1142 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 OLFML2BQ68BL8 750 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 NYAP2Q9P242 653 aa25.99■■□□□ 1.75
SEC22C-213ENST00000456222 ZNF214Q9UL59 606 aaPredicted RBP25.99■■□□□ 1.75
SEC22C-213ENST00000456222 NDUFB10O96000 172 aa25.98■■□□□ 1.75
SEC22C-213ENST00000456222 PRAMEF19Q5SWL8 479 aa25.98■■□□□ 1.75
SEC22C-213ENST00000456222 ANO1Q5XXA6 986 aa25.98■■□□□ 1.75
SEC22C-213ENST00000456222 GDF15Q99988 308 aa25.98■■□□□ 1.75
SEC22C-213ENST00000456222 F5H6K3 240 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 KLRC3Q07444 240 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 ANKRD45Q5TZF3 282 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 CCDC129Q6ZRS4 1044 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 ABRAQ8N0Z2 381 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 CLIP2Q9UDT6 1046 aa25.97■■□□□ 1.75
SEC22C-213ENST00000456222 PGK2P07205 417 aa25.96■■□□□ 1.75
SEC22C-213ENST00000456222 RIOX2Q8IUF8 465 aa25.96■■□□□ 1.75
SEC22C-213ENST00000456222 CEP95Q96GE4 821 aa25.96■■□□□ 1.75
SEC22C-213ENST00000456222 MAML3Q96JK9 1138 aa25.96■■□□□ 1.75
SEC22C-213ENST00000456222 SOX1O00570 391 aaPredicted RBP25.95■■□□□ 1.74
SEC22C-213ENST00000456222 FCER1AP12319 257 aa25.95■■□□□ 1.74
SEC22C-213ENST00000456222 STAT3P40763 770 aa25.95■■□□□ 1.74
SEC22C-213ENST00000456222 YTHDC1Q96MU7 727 aaKnown RBP25.95■■□□□ 1.74
SEC22C-213ENST00000456222 SLC25A27O95847 323 aa25.94■■□□□ 1.74
SEC22C-213ENST00000456222 LRRFIP1Q32MZ4 808 aaKnown RBP25.94■■□□□ 1.74
SEC22C-213ENST00000456222 ZNF444Q8N0Y2 327 aaPredicted RBP25.94■■□□□ 1.74
SEC22C-213ENST00000456222 LRRC47Q8N1G4 583 aaKnown RBP25.94■■□□□ 1.74
SEC22C-213ENST00000456222 MMP19Q99542 508 aa25.94■■□□□ 1.74
SEC22C-213ENST00000456222 SLF1Q9BQI6 1058 aa25.94■■□□□ 1.74
SEC22C-213ENST00000456222 MTMR4Q9NYA4 1195 aa25.94■■□□□ 1.74
SEC22C-213ENST00000456222 COL6A3P12111 3177 aa25.94■■□□□ 1.74
SEC22C-213ENST00000456222 MSCO60682 206 aa25.93■■□□□ 1.74
SEC22C-213ENST00000456222 MAGEA10P43363 369 aaPredicted RBP25.93■■□□□ 1.74
SEC22C-213ENST00000456222 FAM47AQ5JRC9 791 aa25.93■■□□□ 1.74
SEC22C-213ENST00000456222 SENP6Q9GZR1 1112 aaPredicted RBP25.93■■□□□ 1.74
SEC22C-213ENST00000456222 INCENPQ9NQS7 918 aa25.93■■□□□ 1.74
SEC22C-213ENST00000456222 RIPK3Q9Y572 518 aa25.93■■□□□ 1.74
SEC22C-213ENST00000456222 PPARAQ07869 468 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 HDAC1Q13547 482 aaPredicted RBP25.92■■□□□ 1.74
SEC22C-213ENST00000456222 GJC2Q5T442 439 aaPredicted RBP25.92■■□□□ 1.74
SEC22C-213ENST00000456222 VPS53Q5VIR6 699 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 MKL1Q969V6 931 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 NACAP1Q9BZK3 213 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 NAPBQ9H115 298 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 TACC3Q9Y6A5 838 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 PLIN4Q96Q06 1357 aa25.92■■□□□ 1.74
SEC22C-213ENST00000456222 A0A1W2PPC1 479 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 SEPT4O43236 478 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 PDE1AP54750 535 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 ZNF792Q3KQV3 632 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 NEDD1Q8NHV4 660 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 LRCH3Q96II8 777 aa25.91■■□□□ 1.74
SEC22C-213ENST00000456222 DNM1LO00429 736 aa25.9■■□□□ 1.74
SEC22C-213ENST00000456222 BMP8BP34820 402 aa25.9■■□□□ 1.74
SEC22C-213ENST00000456222 ATN1P54259 1190 aaPredicted RBP25.9■■□□□ 1.74
SEC22C-213ENST00000456222 SLC5A4Q9NY91 659 aa25.9■■□□□ 1.74
SEC22C-213ENST00000456222 TTLL1O95922 423 aa25.89■■□□□ 1.74
SEC22C-213ENST00000456222 TAL1P17542 331 aaPredicted RBP25.89■■□□□ 1.74
SEC22C-213ENST00000456222 TFAP4Q01664 338 aa25.89■■□□□ 1.74
SEC22C-213ENST00000456222 CTDSPL2Q05D32 466 aa25.89■■□□□ 1.74
SEC22C-213ENST00000456222 SNRNP48Q6IEG0 339 aaKnown RBP25.89■■□□□ 1.74
SEC22C-213ENST00000456222 ZNF287Q9HBT7 754 aa25.89■■□□□ 1.74
SEC22C-213ENST00000456222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.89■■□□□ 1.74
SEC22C-213ENST00000456222 MCM3APO60318 1980 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 TSPY3P0CV98 308 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 TSPY8P0CW00 308 aa25.88■■□□□ 1.73
SEC22C-213ENST00000456222 KCTD2Q14681 263 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms