RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CRY2Q49AN0 593 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
COL27A1-202ENST00000451716 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
COL27A1-202ENST00000451716 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 MFSD14BQ5SR56 506 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
COL27A1-202ENST00000451716 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 NEMFO60524 1076 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 CDC25AP30304 524 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 GSTO1P78417 241 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 TRPC5Q9UL62 973 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-202ENST00000451716 FAM205AQ6ZU69 1335 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 LAMB1P07942 1786 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 IRF6O14896 467 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-202ENST00000451716 ADRA2BP18089 450 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 KIF5BP33176 963 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
COL27A1-202ENST00000451716 GSDMDP57764 484 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 TEX11Q8IYF3 940 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
COL27A1-202ENST00000451716 MED15Q96RN5 788 aa13.74□□□□□ -0.21
COL27A1-202ENST00000451716 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
COL27A1-202ENST00000451716 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
COL27A1-202ENST00000451716 RASA1P20936 1047 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.212e-8■□□□□ 8.2
COL27A1-202ENST00000451716 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
COL27A1-202ENST00000451716 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 MAD2L2Q9UI95 211 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 CYTH3O43739 400 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 PPP4CP60510 307 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 MORC3Q14149 939 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 IL17AQ16552 155 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 IMPACTQ9P2X3 320 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 COBLO75128 1261 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 LDHCP07864 332 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 PAGE5Q96GU1 130 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
COL27A1-202ENST00000451716 INTS13Q9NVM9 706 aa13.73□□□□□ -0.21
COL27A1-202ENST00000451716 STX17P56962 302 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
COL27A1-202ENST00000451716 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 MAST2Q6P0Q8 1798 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 SLFN14P0C7P3 912 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■□□ 14.9
COL27A1-202ENST00000451716 CDK8P49336 464 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 GTF2IP78347 998 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
COL27A1-202ENST00000451716 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 BLIDQ8IZY5 108 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
COL27A1-202ENST00000451716 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
COL27A1-202ENST00000451716 IL1R1P14778 569 aa13.71□□□□□ -0.21
COL27A1-202ENST00000451716 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
COL27A1-202ENST00000451716 PROM2Q8N271 834 aa13.71□□□□□ -0.21
COL27A1-202ENST00000451716 EYA3Q99504 573 aa13.71□□□□□ -0.21
COL27A1-202ENST00000451716 MXD3Q9BW11 206 aa13.71□□□□□ -0.21
COL27A1-202ENST00000451716 FLT1P17948 1338 aa13.71□□□□□ -0.21
COL27A1-202ENST00000451716 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.22
COL27A1-202ENST00000451716 RHBDL3P58872 404 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 PICALMQ13492 652 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 GRM4Q14833 912 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 PTPN14Q15678 1187 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.22
COL27A1-202ENST00000451716 HOMER1Q86YM7 354 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 ELOA2Q8IYF1 753 aaPredicted RBP13.71□□□□□ -0.22
COL27A1-202ENST00000451716 MLKLQ8NB16 471 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 SH3BP1Q9Y3L3 701 aa13.71□□□□□ -0.22
COL27A1-202ENST00000451716 BBOX1O75936 387 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 KANK3Q6NY19 840 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 USP17L2Q6R6M4 530 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 SPATA20Q8TB22 786 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
COL27A1-202ENST00000451716 NAA30Q147X3 362 aaPredicted RBP13.7□□□□□ -0.22
COL27A1-202ENST00000451716 BMP15O95972 392 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
COL27A1-202ENST00000451716 NYAP1Q6ZVC0 841 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 VSTM4Q8IW00 320 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 PCDHA4Q9UN74 947 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
COL27A1-202ENST00000451716 KLRF2D3W0D1 207 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms