RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DNM1LO00429 736 aa16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 SLC25A27O95847 323 aa16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 AKR1B1P15121 316 aa16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 GSPT1P15170 499 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 OSBPL3Q9H4L5 887 aa16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-213ENST00000448520 CYBAP13498 195 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 PLS1Q14651 629 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 RLFQ13129 1914 aa16.42■□□□□ 0.22
PDLIM2-213ENST00000448520 SEPT4O43236 478 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 COBLO75128 1261 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 FCER1AP12319 257 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 LBHD1Q9BQE6 289 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
PDLIM2-213ENST00000448520 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 ERC2O15083 957 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
PDLIM2-213ENST00000448520 MYH7P12883 1935 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 CYP2D7A0A087X1C5 515 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 KBTBD13C9JR72 458 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 COPB2P35606 906 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 SBK1Q52WX2 424 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 DEFB123Q8N688 67 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 PUS7LQ9H0K6 701 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
PDLIM2-213ENST00000448520 FRMPD3Q5JV73 1810 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 CHGBP05060 677 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 ATN1P54259 1190 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 GJC2Q5T442 439 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 MAML3Q96JK9 1138 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 ZNF236Q9UL36 1845 aa16.38■□□□□ 0.21
PDLIM2-213ENST00000448520 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 SDSP20132 328 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 STAT3P40763 770 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 SLC39A5Q6ZMH5 540 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 CLEC10AQ8IUN9 316 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 MMP19Q99542 508 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 DNAH12Q6ZR08 3092 aa16.37■□□□□ 0.21
PDLIM2-213ENST00000448520 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 VWA5AO00534 786 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 RTP1P59025 263 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 KCTD2Q14681 263 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 LRRFIP1Q32MZ4 808 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 PRAMEF19Q5SWL8 479 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
PDLIM2-213ENST00000448520 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 GNAT2P19087 354 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 C1orf53Q5VUE5 145 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 APPBP2Q92624 585 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 STXBP5LQ9Y2K9 1186 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 A0A0G2JMZ2 1700 aa16.35■□□□□ 0.21
PDLIM2-213ENST00000448520 COL6A3P12111 3177 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 PARP14Q460N5 1801 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 RAD21O60216 631 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 RARBP10826 455 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 SNX17Q15036 470 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 LRRC41Q15345 812 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-213ENST00000448520 ATP11BQ9Y2G3 1177 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms