RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 ENTPD3O75355 529 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
LINC00642-203ENST00000444942 ADD2P35612 726 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 PDE1AP54750 535 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 NUCB1Q02818 461 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00642-203ENST00000444942 RAB30Q15771 203 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 MORN1Q5T089 497 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 IDI2Q9BXS1 227 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 ARMT1Q9H993 441 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 PKD1L2Q7Z442 2459 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 PLCG2P16885 1265 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 CNGA1P29973 690 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 MAPK4P31152 587 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 PPP4CP60510 307 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 MFSD14CQ5VZR4 134 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 LCORLQ8N3X6 602 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 IPO9Q96P70 1041 aaKnown RBP11.1□□□□□ -0.63
LINC00642-203ENST00000444942 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
LINC00642-203ENST00000444942 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
LINC00642-203ENST00000444942 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
LINC00642-203ENST00000444942 DCHS1Q96JQ0 3298 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 MYH8P13535 1937 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 FLT1P17948 1338 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
LINC00642-203ENST00000444942 MBD4O95243 580 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 ALADP13716 330 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 POU3F3P20264 500 aaPredicted RBP11.09□□□□□ -0.63
LINC00642-203ENST00000444942 ADCYAP1R1P41586 468 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 FLRT1Q9NZU1 646 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
LINC00642-203ENST00000444942 PRKAB2O43741 272 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 PEX10O60683 326 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 TMEM240Q5SV17 173 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 C16orf59Q7L2K0 433 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 RIOK1Q9BRS2 568 aaKnown RBP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 PUS7LQ9H0K6 701 aaKnown RBP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.08□□□□□ -0.64
LINC00642-203ENST00000444942 TRIOO75962 3097 aa11.08□□□□□ -0.64
LINC00642-203ENST00000444942 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
LINC00642-203ENST00000444942 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
LINC00642-203ENST00000444942 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 HLA-CQ95604 372 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
LINC00642-203ENST00000444942 PORCNQ9H237 461 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 YBX2Q9Y2T7 364 aaKnown RBP11.07□□□□□ -0.64
LINC00642-203ENST00000444942 MTCH2Q9Y6C9 303 aa11.07□□□□□ -0.64
LINC00642-203ENST00000444942 SMCHD1A6NHR9 2005 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 M0R2C6 588 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
LINC00642-203ENST00000444942 CYP2D6P10635 497 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 HMGCS2P54868 508 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 EVX2Q03828 476 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 CCDC174Q6PII3 467 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 GJD3Q8N144 294 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 SLC4A4Q9Y6R1 1079 aa11.06□□□□□ -0.64
LINC00642-203ENST00000444942 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
LINC00642-203ENST00000444942 CYP2D7A0A087X1C5 515 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 IGSF3O75054 1194 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 KRT37O76014 449 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 CYBAP13498 195 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 SPP2Q13103 211 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 Q3C1V9 767 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
LINC00642-203ENST00000444942 SLC44A5Q8NCS7 719 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 APPBP2Q92624 585 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 MCM9Q9NXL9 1143 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
LINC00642-203ENST00000444942 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms