RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 EFCC1Q9HA90 598 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 BACH1O14867 736 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 COBLO75128 1261 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GPSM2P81274 684 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 AXDND1Q5T1B0 1012 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TBCAO75347 108 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 IFNAR1P17181 557 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GOLGA8FQ08AF8 430 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GOLGA8DPQ0D2H9 430 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CASQ1P31415 396 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 AMPD3Q01432 767 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 UBE2Q2LH0YL09 131 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LIFRP42702 1097 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TRAF1Q13077 416 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 ICE2Q659A1 982 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 EXOC1Q9NV70 894 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SEMA3EO15041 775 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SLC16A2P36021 539 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 MYO1CO00159 1063 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 GUCY1A2P33402 732 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP8P40818 1118 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 DNA2P51530 1060 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SH3RF3Q8TEJ3 882 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TSG101Q99816 390 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 VPS16Q9H269 839 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 NFAT5O94916 1531 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 H0YHG0 523 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ERCC3P19447 782 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CDC25AP30304 524 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 LRP10Q7Z4F1 713 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 NMT2O60551 498 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ANKRD7Q92527 254 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 LZTFL1Q9NQ48 299 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CSADQ9Y600 493 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SORBS3O60504 671 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 NTSR2O95665 410 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 FBXO38Q6PIJ6 1188 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KCTD1Q719H9 257 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MAEAQ7L5Y9 396 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CSRNP2Q9H175 543 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 JRKLQ9Y4A0 524 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KIF5CO60282 957 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 ALAS1P13196 640 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 MXD3Q9BW11 206 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms