RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CCDC6Q16204 474 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 MAGEB6Q8N7X4 407 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 HELBQ8NG08 1087 aaPredicted RBP7.07□□□□□ -1.28
BDNF-211ENST00000439476 CCDC51Q96ER9 411 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 TRAIPQ9BWF2 469 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 PARD6BQ9BYG5 372 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 TRIM6Q9C030 488 aaPredicted RBP7.07□□□□□ -1.28
BDNF-211ENST00000439476 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 MAPK8IP1Q9UQF2 711 aa7.07□□□□□ -1.28
BDNF-211ENST00000439476 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.07□□□□□ -1.28
BDNF-211ENST00000439476 MACROD2A1Z1Q3 448 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 PRAMEF22A3QJZ6 481 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 AP5Z1O43299 807 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 MBD4O95243 580 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 TPP2P29144 1249 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 GSCP56915 257 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 ZMYM1Q5SVZ6 1142 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 SRGAP1Q7Z6B7 1085 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 BICD1Q96G01 975 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 FUCA2Q9BTY2 467 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 TAB2Q9NYJ8 693 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 ARHGEF40Q8TER5 1519 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 DYTNA2CJ06 578 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 MCM7P33993 719 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 MAP3K9P80192 1104 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 DTHD1Q6ZMT9 781 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 MMS22LQ6ZRQ5 1243 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 TTC30BQ8N4P2 665 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 STAMQ92783 540 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 FAM89AQ96GI7 184 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 ANKRD2Q9GZV1 360 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 UBAP1Q9NZ09 502 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 SAMD15Q9P1V8 674 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 STIM2Q9P246 746 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 CDC23Q9UJX2 597 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 TMEM2Q9UHN6 1383 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 DIP2BQ9P265 1576 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 CRB1P82279 1406 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 ARHGAP31Q2M1Z3 1444 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 CCDC151A5D8V7 595 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 ERCC3P19447 782 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 PPP2R5EQ16537 467 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 WHAMMP3Q1A5X7 153 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 PUS10Q3MIT2 529 aaKnown RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 RUFY4Q6ZNE9 571 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 NOSTRINQ8IVI9 506 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 VSTM4Q8IW00 320 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 MIGA1Q8NAN2 632 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 RRP36Q96EU6 259 aaKnown RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 CFAP57Q96MR6 1250 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 GDAP1L1Q96MZ0 367 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 SCLT1Q96NL6 688 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 MMRN2Q9H8L6 949 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 ROBO2Q9HCK4 1378 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 LTKP29376 864 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 SH3BGRP55822 239 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 KIF23Q02241 960 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 CALCOCO2Q13137 446 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 DHX40Q8IX18 779 aaKnown RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 RABEP2Q9H5N1 569 aa7.06□□□□□ -1.28
BDNF-211ENST00000439476 RABL2AQ9UBK7 228 aaPredicted RBP7.06□□□□□ -1.28
BDNF-211ENST00000439476 NRXN1Q9ULB1 1477 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 PABPN1LA6NDY0 278 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 HMGB1P1B2RPK0 211 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 BTBD18B2RXH4 712 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ACTN4O43707 911 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 CCZ1BP86790 482 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 CCZ1P86791 482 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 PAK1Q13153 545 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 CCDC14Q49A88 953 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 TRIM42Q8IWZ5 723 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 CCDC65Q8IXS2 484 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
BDNF-211ENST00000439476 MAST3O60307 1309 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 PPP6R2O75170 966 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ZRANB2O95218 330 aaKnown RBP eCLIP7.05□□□□□ -1.28
BDNF-211ENST00000439476 HOXA7P31268 230 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 ARHGAP25P42331 645 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ST5P78524 1137 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 SPATS2Q86XZ4 545 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 EXOC4Q96A65 974 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 ALDH8A1Q9H2A2 487 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 ZMYM6O95789 1325 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 PPRC1Q5VV67 1664 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 MAGEA9P43362 315 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 NAPAP54920 295 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 PTPN12Q05209 780 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 LRRC24Q50LG9 513 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 CNNM4Q6P4Q7 775 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 SRLQ86TD4 932 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 PPFIBP2Q8ND30 876 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 IFT81Q8WYA0 676 aa7.05□□□□□ -1.28
BDNF-211ENST00000439476 RSRC1Q96IZ7 334 aaKnown RBP7.05□□□□□ -1.28
BDNF-211ENST00000439476 NLRP3Q96P20 1036 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms