RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 PLS1Q14651 629 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 TDRD12Q587J7 1177 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 DEFB132Q7Z7B7 95 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
TRAPPC9-202ENST00000438773 LTN1O94822 1766 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZNF75DP51815 510 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SLFN13Q68D06 897 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 CALCRLQ16602 461 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 EPB41L4AQ9HCS5 686 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 KIF5CO60282 957 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 CFBP00751 764 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 FGFR2P21802 821 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 KLRK1P26718 216 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 ABCB5Q2M3G0 1257 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
TRAPPC9-202ENST00000438773 MROH7-TTC4A0A0A0MT08 1334 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 TTLL1O95922 423 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
TRAPPC9-202ENST00000438773 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.334e-7■■■■□ 25.8
TRAPPC9-202ENST00000438773 FANCCQ00597 558 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 CCDC93Q567U6 631 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PODNQ7Z5L7 613 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
TRAPPC9-202ENST00000438773 SWAP70Q9UH65 585 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PPP6R2O75170 966 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PDE4DQ08499 809 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
TRAPPC9-202ENST00000438773 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
TRAPPC9-202ENST00000438773 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZNF827Q17R98 1081 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PTF1AQ7RTS3 328 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 TXLNBQ8N3L3 684 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-202ENST00000438773 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 MTA3Q9BTC8 594 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PSTPIP2Q9H939 334 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 PCDHA5Q9Y5H7 936 aa13□□□□□ -0.33
TRAPPC9-202ENST00000438773 LMAN1P49257 510 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PRKG1Q13976 671 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 CABP7Q86V35 215 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 KCNB2Q92953 911 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 H7C1D1 291 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PHACTR2O75167 634 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 ANTXR2P58335 489 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 SETQ01105 290 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 TMTC3Q6ZXV5 915 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GTPBP4Q9BZE4 634 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GDF11O95390 407 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GYS1P13807 737 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 SPICE1Q8N0Z3 855 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 CWC15Q9P013 229 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PI4KBQ9UBF8 816 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 SLC16A2P36021 539 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 GNG11P61952 73 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 MCM6Q14566 821 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 IGDCC4Q8TDY8 1250 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
TRAPPC9-202ENST00000438773 FAM208AQ9UK61 1670 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 BICDL2A1A5D9 508 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms