RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 SLC1A4P43007 532 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 ATP1A2P50993 1020 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 SMTNP53814 917 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CLUL1Q15846 466 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 EYA3Q99504 573 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 RAB17Q9H0T7 212 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 KCNK3O14649 394 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 GCNT3O95395 438 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 PCK1P35558 622 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 SP4Q02446 784 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 PTPN21Q16825 1174 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 MYCT1Q8N699 235 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 MRRFQ96E11 262 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 PLCB1Q9NQ66 1216 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CAPN7Q9Y6W3 813 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 TMEM2Q9UHN6 1383 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 MRPL44Q9H9J2 332 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 BUB1O43683 1085 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 ADORA1P30542 326 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 TECP42680 631 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 POLA2Q14181 598 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 TGFBRAP1Q8WUH2 860 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 MYO1AQ9UBC5 1043 aa12.37□□□□□ -0.43
SEMA4D-211ENST00000438547 BCRP11274 1271 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 PDLIM2Q96JY6 352 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 STAT1P42224 750 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 BAIAP2L1Q9UHR4 511 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 EEF2KMTQ96G04 330 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 CCDC151A5D8V7 595 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 BCAMP50895 628 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 CLCN6P51797 869 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 RBL2Q08999 1139 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
SEMA4D-211ENST00000438547 KRIT1O00522 736 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 RGS16O15492 202 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 PDE8BO95263 885 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 XRCC5P13010 732 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 PHKA1P46020 1223 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 LIG3P49916 1009 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ARHGAP44Q17R89 818 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ENC1O14682 589 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 CIAO1O76071 339 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 SASH1O94885 1247 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 MAEAQ7L5Y9 396 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 LMNTD2Q8IXW0 634 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 FAM169AQ9Y6X4 670 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 LTKP29376 864 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 NEDD9Q14511 834 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 VSTM4Q8IW00 320 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 CACNA2D3Q8IZS8 1091 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 SLC39A2Q9NP94 309 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ATP7BP35670 1465 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 HARSP12081 509 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 ARMCX3Q9UH62 379 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-211ENST00000438547 COBLO75128 1261 aa12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 GYG1P46976 350 aa12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 SPATS2Q86XZ4 545 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
SEMA4D-211ENST00000438547 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms