RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 VWA5AO00534 786 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GJC2Q5T442 439 aaPredicted RBP13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DIS3Q9Y2L1 958 aaKnown RBP13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SLC4A4Q9Y6R1 1079 aa13.17□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 FCER1AP12319 257 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PLS1Q14651 629 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 LRRC41Q15345 812 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GOPCQ9HD26 462 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 RASA1P20936 1047 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 COPB2P35606 906 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 ZSCAN25Q6NSZ9 544 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 KBTBD3Q8NAB2 608 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 MMP19Q99542 508 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 LBHD1Q9BQE6 289 aaPredicted RBP13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PDLIM7Q9NR12 457 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 VCANP13611 3396 aa13.15□□□□□ -0.3
SPTLC1P4-201ENST00000435997 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.31
SPTLC1P4-201ENST00000435997 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 DLL1O00548 723 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ATP2A1O14983 1001 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PGK2P07205 417 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 STAT3P40763 770 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 FAM83BQ5T0W9 1011 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 APPBP2Q92624 585 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TINF2Q9BSI4 451 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ECHDC1Q9NTX5 307 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ATP11BQ9Y2G3 1177 aa13.14□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ADAMTS4O75173 837 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 NDUFB10O96000 172 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 RARBP10826 455 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ITGB8P26012 769 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 KCTD2Q14681 263 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 C9orf50Q5SZB4 431 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 MAMDC4Q6UXC1 1216 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SH3RF1Q7Z6J0 888 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 LENG1Q96BZ8 264 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 XPNPEP3Q9NQH7 507 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SYNGAP1Q96PV0 1343 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 EYSQ5T1H1 3165 aa13.12□□□□□ -0.31
SPTLC1P4-201ENST00000435997 MYH7P12883 1935 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms