RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 SLC35B4Q969S0 331 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 RNPC3Q96LT9 517 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 UBE2OQ9C0C9 1292 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 F8VZ95 297 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 DIAPH2O60879 1101 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 CPA1P15085 419 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 CYP11B2P19099 503 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 CMPK2Q5EBM0 449 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 MAATS1Q7Z4T9 603 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 APBB1IPQ7Z5R6 666 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 SESTD1Q86VW0 696 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 UNC5CLQ8IV45 518 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 ATRIPQ8WXE1 791 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 ARL8AQ96BM9 186 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 OPTNQ96CV9 577 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 RUFY1Q96T51 708 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 NDST4Q9H3R1 872 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 HDAC6Q9UBN7 1215 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 ANKARQ7Z5J8 1434 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 C5orf60A6NFR6 353 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMEM232C9JQI7 657 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZNF189O75820 626 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 SLC3A2P08195 630 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 VCAM1P19320 739 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 TSNAXIP1Q2TAA8 658 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 EXOC8Q8IYI6 725 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 THEMISQ8N1K5 641 aaPredicted RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCT6BQ92526 530 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 JAKMIP2Q96AA8 810 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 CDC5LQ99459 802 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 GALNT8Q9NY28 637 aa9.88□□□□□ -0.83
CDC42BPA-206ENST00000429440 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 N4BP3O15049 544 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 HSF2BPO75031 334 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 PARP1P09874 1014 aaKnown RBP9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 CKAP4Q07065 602 aaKnown RBP9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 NNTQ13423 1086 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 SPRED3Q2MJR0 410 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 KBTBD12Q3ZCT8 623 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 TRAPPC11Q7Z392 1133 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 PDILTQ8N807 584 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 PPP1R14BQ96C90 147 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 EYA1Q99502 592 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 SYNPO2Q9UMS6 1093 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 MAPK8IP1Q9UQF2 711 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 L3MBTL1Q9Y468 752 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 NEDD4P46934 1319 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 CEP104O60308 925 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 CUL4BQ13620 913 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 SEPT2Q15019 361 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 PPP1R7Q15435 360 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 EMBQ6PCB8 327 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 AGAP11Q8TF27 550 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 FBXW7Q969H0 707 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 TEKT1Q969V4 418 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 HVCN1Q96D96 273 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 TRAPPC9Q96Q05 1148 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 DMAP1Q9NPF5 467 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 INTS13Q9NVM9 706 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 AATFQ9NY61 560 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 MYH15Q9Y2K3 1946 aa9.87□□□□□ -0.83
CDC42BPA-206ENST00000429440 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 E7EVH7 732 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CDC25CP30307 473 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 SEC24CP53992 1094 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 GUCY1A3Q02108 690 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 NCAPH2Q6IBW4 605 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCDC70Q6NSX1 233 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ARFGAP2Q8N6H7 521 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 SMCR8Q8TEV9 937 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 NAF1Q96HR8 494 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 IWS1Q96ST2 819 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 H3BQV1 296 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 TFRCP02786 760 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 NR1D1P20393 614 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 PSMA5P28066 241 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ATP1A2P50993 1020 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ADKP55263 362 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMEM62Q0P6H9 643 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ADCK5Q3MIX3 580 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 NAA16Q6N069 864 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CD302Q8IX05 232 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CACNA2D3Q8IZS8 1091 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCDC63Q8NA47 563 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 CAVIN3Q969G5 261 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms