RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 USP6NLQ92738 828 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
ATG4B-210ENST00000428861 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
ATG4B-210ENST00000428861 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
ATG4B-210ENST00000428861 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 ZNF213O14771 459 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 SGSM2O43147 1006 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-210ENST00000428861 CYP2B6P20813 491 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 MAPK4P31152 587 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 SLFN13Q68D06 897 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 PLEKHH3Q7Z736 793 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 PPP1R9AQ9ULJ8 1098 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
ATG4B-210ENST00000428861 RAD50Q92878 1312 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 VWA5AO00534 786 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 INHAP05111 366 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 NBPF11Q86T75 865 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 PXYLP1Q8TE99 480 aa12.71□□□□□ -0.37
ATG4B-210ENST00000428861 ERCC3P19447 782 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 PTPREP23469 700 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 MCCP23508 829 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 PLS1Q14651 629 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 CCL14Q16627 93 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 WDR78Q5VTH9 848 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 TRIB2Q92519 343 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 TMEM47Q9BQJ4 181 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 ZKSCAN3Q9BRR0 538 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 TCP11L1Q9NUJ3 509 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-210ENST00000428861 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
ATG4B-210ENST00000428861 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 B4E1Z4 1266 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 CYP21A2P08686 494 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 BMP3P12645 472 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 CCL5P13501 91 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 CCNA1P78396 465 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 GRB14Q14449 540 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
ATG4B-210ENST00000428861 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
ATG4B-210ENST00000428861 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 NPLOC4Q8TAT6 608 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 BIN2Q9UBW5 565 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-210ENST00000428861 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
ATG4B-210ENST00000428861 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 TMEM232C9JQI7 657 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 COBLO75128 1261 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 KDM4AO75164 1064 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 TTBK2Q6IQ55 1244 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 STOX1Q6ZVD7 989 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 SHCBP1Q8NEM2 672 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
ATG4B-210ENST00000428861 TNRC18O15417 2968 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-210ENST00000428861 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 IGHA2P01877 340 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 HMGCRP04035 888 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 NEFLP07196 543 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 TAL1P17542 331 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 ADORA2AP29274 412 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 STAT3P40763 770 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 RGS2P41220 211 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 SLC1A4P43007 532 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 SNAP25P60880 206 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 UBXN2AP68543 259 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 PRPF38AQ8NAV1 312 aaKnown RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 ESR2Q92731 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms