RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CACNB3P54284 484 aa18■□□□□ 0.47
PKP4-205ENST00000426248 SH3RF3Q8TEJ3 882 aaPredicted RBP18■□□□□ 0.47
PKP4-205ENST00000426248 BIRC2Q13490 618 aa18■□□□□ 0.47
PKP4-205ENST00000426248 TMTC2Q8N394 836 aa18■□□□□ 0.47
PKP4-205ENST00000426248 AFAP1L1Q8TED9 768 aa18■□□□□ 0.47
PKP4-205ENST00000426248 CPLX3Q8WVH0 158 aa18■□□□□ 0.47
PKP4-205ENST00000426248 DYNLL2Q96FJ2 89 aa18■□□□□ 0.47
PKP4-205ENST00000426248 TMEM87BQ96K49 555 aa18■□□□□ 0.47
PKP4-205ENST00000426248 DESI2Q9BSY9 194 aa18■□□□□ 0.47
PKP4-205ENST00000426248 DONSONQ9NYP3 566 aa18■□□□□ 0.47
PKP4-205ENST00000426248 HDAC9Q9UKV0 1011 aa18■□□□□ 0.47
PKP4-205ENST00000426248 TOGARAM1Q9Y4F4 1720 aa18■□□□□ 0.47
PKP4-205ENST00000426248 A0A087WUV0 522 aaPredicted RBP18■□□□□ 0.47
PKP4-205ENST00000426248 A0A1B0GVL5 298 aa18■□□□□ 0.47
PKP4-205ENST00000426248 INPP5BP32019 993 aa18■□□□□ 0.47
PKP4-205ENST00000426248 SARNPP82979 210 aaKnown RBP18■□□□□ 0.47
PKP4-205ENST00000426248 ARMCX5Q6P1M9 558 aa18■□□□□ 0.47
PKP4-205ENST00000426248 PGBD1Q96JS3 809 aa18■□□□□ 0.47
PKP4-205ENST00000426248 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
PKP4-205ENST00000426248 ZNF277Q9NRM2 450 aaPredicted RBP18■□□□□ 0.47
PKP4-205ENST00000426248 CDR1P51861 262 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 TTC14Q96N46 770 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 MARCH6O60337 910 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 TUBB4AP04350 444 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 SCRN1Q12765 414 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
PKP4-205ENST00000426248 IQCB1Q15051 598 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 SATB1Q01826 763 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 ZNF396Q96N95 335 aaPredicted RBP17.99■□□□□ 0.47
PKP4-205ENST00000426248 CAPN7Q9Y6W3 813 aa17.99■□□□□ 0.47
PKP4-205ENST00000426248 PDIA3P30101 505 aaKnown RBP17.98■□□□□ 0.47
PKP4-205ENST00000426248 CORO7P57737 925 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 CCDC96Q2M329 555 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 DHX58Q96C10 678 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 IMPACTQ9P2X3 320 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 RFX7Q2KHR2 1363 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 GLI3P10071 1580 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 RGL2O15211 777 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 SSBP05455 408 aaKnown RBP eCLIP17.98■□□□□ 0.47
PKP4-205ENST00000426248 SARM1Q6SZW1 724 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 FUT8Q9BYC5 575 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
PKP4-205ENST00000426248 TXLNAP40222 546 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 CCDC93Q567U6 631 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 TTC19Q6DKK2 380 aaPredicted RBP17.97■□□□□ 0.47
PKP4-205ENST00000426248 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 NOC3LQ8WTT2 800 aaKnown RBP17.97■□□□□ 0.47
PKP4-205ENST00000426248 ATP8A2Q9NTI2 1148 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
PKP4-205ENST00000426248 TNKSO95271 1327 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 DPEP1P16444 411 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 COL9A3Q14050 684 aaPredicted RBP17.97■□□□□ 0.47
PKP4-205ENST00000426248 RABGGTAQ92696 567 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 GBP3Q9H0R5 595 aa17.97■□□□□ 0.47
PKP4-205ENST00000426248 NEDD4P46934 1319 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 SCP2P22307 547 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
PKP4-205ENST00000426248 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
PKP4-205ENST00000426248 FANCCQ00597 558 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 EPB41L4AQ9HCS5 686 aaPredicted RBP17.96■□□□□ 0.47
PKP4-205ENST00000426248 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 CBFA2T2O43439 604 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 MYO1BO43795 1136 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 KIF5CO60282 957 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 PPARDQ03181 441 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 WASF1Q92558 559 aa17.96■□□□□ 0.47
PKP4-205ENST00000426248 CLRN2A0PK11 232 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 CCDC151A5D8V7 595 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 ECE2O60344 883 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 SLC44A5Q8NCS7 719 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 ABCB6Q9NP58 842 aa17.96■□□□□ 0.46
PKP4-205ENST00000426248 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.46
PKP4-205ENST00000426248 BRD3Q15059 726 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 DALRD3Q5D0E6 543 aaKnown RBP17.95■□□□□ 0.46
PKP4-205ENST00000426248 WDR24Q96S15 920 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 PPP2R2CQ9Y2T4 447 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 RUFY1Q96T51 708 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 KIF1CO43896 1103 aaKnown RBP17.95■□□□□ 0.46
PKP4-205ENST00000426248 N4BP2L2Q92802 583 aaPredicted RBP17.95■□□□□ 0.46
PKP4-205ENST00000426248 SAMM50Q9Y512 469 aa17.95■□□□□ 0.46
PKP4-205ENST00000426248 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 OTUD6BQ8N6M0 293 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 CAMKK2Q96RR4 588 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 MYH14Q7Z406 1995 aaKnown RBP17.94■□□□□ 0.46
PKP4-205ENST00000426248 KIF5BP33176 963 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 DLGAP5Q15398 846 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 ZNF654Q8IZM8 581 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 PFKFB2O60825 505 aa17.94■□□□□ 0.46
PKP4-205ENST00000426248 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
PKP4-205ENST00000426248 BAG1Q99933 345 aaPredicted RBP17.94■□□□□ 0.46
PKP4-205ENST00000426248 USP17L3A6NCW0 530 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms