RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TTC14Q96N46 770 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 PSTPIP2Q9H939 334 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 SUGT1Q9Y2Z0 365 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 SCG2P13521 617 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 SFPQP23246 707 aaKnown RBP eCLIP10.98□□□□□ -0.656e-6■■□□□ 12.5
CMSS1-201ENST00000421999 CCNA1P78396 465 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 WRNIP1Q96S55 665 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 MRPL11Q9Y3B7 192 aaKnown RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 N4BP3O15049 544 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 SORBS3O60504 671 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 NEBLO76041 1014 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 KRT13P13646 458 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 TTC38Q5R3I4 469 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 ARHGEF16Q5VV41 709 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 MYSM1Q5VVJ2 828 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 USP37Q86T82 979 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 LEO1Q8WVC0 666 aaPredicted RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 GJB4Q9NTQ9 266 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 CCDC169A6NNP5 214 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 ASNSP08243 561 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 STX1AQ16623 288 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 GNPTABQ3T906 1256 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 NUP88Q99567 741 aaPredicted RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 MLXIPQ9HAP2 919 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 CDC42EP5Q6NZY7 148 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 TXLNBQ8N3L3 684 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 CPVLQ9H3G5 476 aa10.98□□□□□ -0.65
CMSS1-201ENST00000421999 FAM208AQ9UK61 1670 aaKnown RBP10.98□□□□□ -0.65
CMSS1-201ENST00000421999 TSGA10IPQ3SY00 556 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 PLCD1P51178 756 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 USP14P54578 494 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 GPATCH4Q5T3I0 446 aaKnown RBP10.97□□□□□ -0.65
CMSS1-201ENST00000421999 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-201ENST00000421999 LRWD1Q9UFC0 647 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 CNOT7Q9UIV1 285 aaKnown RBP10.97□□□□□ -0.65
CMSS1-201ENST00000421999 KCPQ6ZWJ8 1503 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 FLT1P17948 1338 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 IFNAR1P17181 557 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 TGFB2P61812 414 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 ATL3Q6DD88 541 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 ADGRA1Q86SQ6 560 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 CEP95Q96GE4 821 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 SPAG5Q96R06 1193 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 CAMKK2Q96RR4 588 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 ZNF341Q9BYN7 854 aa10.97□□□□□ -0.65
CMSS1-201ENST00000421999 GCOM1H8Y6P7 765 aaPredicted RBP10.96□□□□□ -0.65
CMSS1-201ENST00000421999 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 POLR2MP0CAP2 368 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 BMP3P12645 472 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 SEPT2Q15019 361 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 SPA17Q15506 151 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 NOSTRINQ8IVI9 506 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 FAM114A1Q8IWE2 563 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 RNF26Q9BY78 433 aaPredicted RBP10.96□□□□□ -0.65
CMSS1-201ENST00000421999 IMPG2Q9BZV3 1241 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 USP25Q9UHP3 1055 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 ZHX2Q9Y6X8 837 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 CCP110O43303 1012 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 STX17P56962 302 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 RAD51AP2Q09MP3 1159 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.65
CMSS1-201ENST00000421999 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
CMSS1-201ENST00000421999 LY9Q9HBG7 655 aa10.96□□□□□ -0.65
CMSS1-201ENST00000421999 GAS7O60861 476 aa10.96□□□□□ -0.66
CMSS1-201ENST00000421999 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.66
CMSS1-201ENST00000421999 BLIDQ8IZY5 108 aa10.96□□□□□ -0.66
CMSS1-201ENST00000421999 GPR75-ASB3A0A0A6YYF3 556 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■■■■■ 49.8
CMSS1-201ENST00000421999 OSBPP22059 807 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 HHIPL2Q6UWX4 724 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 KCNQ5Q9NR82 932 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 CALCRLQ16602 461 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 PRR16Q569H4 304 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 RASGRP4Q8TDF6 673 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 PIGSQ96S52 555 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 OSBPL5Q9H0X9 879 aaPredicted RBP10.95□□□□□ -0.66
CMSS1-201ENST00000421999 MACROD2A1Z1Q3 448 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
CMSS1-201ENST00000421999 AKR1B1P15121 316 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 DNA2P51530 1060 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 UBXN2AP68543 259 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
CMSS1-201ENST00000421999 SPP2Q13103 211 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms