RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ZMYND8Q9ULU4 1186 aaPredicted RBP22.64■■□□□ 1.21
VARS2-202ENST00000421263 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
VARS2-202ENST00000421263 PLS1Q14651 629 aa22.63■■□□□ 1.21
VARS2-202ENST00000421263 NCAPG2Q86XI2 1143 aa22.63■■□□□ 1.21
VARS2-202ENST00000421263 FBXO28Q9NVF7 368 aa22.63■■□□□ 1.21
VARS2-202ENST00000421263 PPP1R9AQ9ULJ8 1098 aa22.63■■□□□ 1.21
VARS2-202ENST00000421263 FRMPD3Q5JV73 1810 aa22.63■■□□□ 1.21
VARS2-202ENST00000421263 MINDY4BA8MYZ0 360 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 M0R2C6 588 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 VWA5AO00534 786 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 CNGA1P29973 690 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 LRRC26Q2I0M4 334 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 RIOX2Q8IUF8 465 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 MKNK2Q9HBH9 465 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 SLC5A4Q9NY91 659 aa22.62■■□□□ 1.21
VARS2-202ENST00000421263 IGKV6D-41A0A0C4DH26 115 aa22.61■■□□□ 1.21
VARS2-202ENST00000421263 ERC2O15083 957 aa22.61■■□□□ 1.21
VARS2-202ENST00000421263 FCER1AP12319 257 aa22.61■■□□□ 1.21
VARS2-202ENST00000421263 SYN1P17600 705 aa22.61■■□□□ 1.21
VARS2-202ENST00000421263 LRRFIP1Q32MZ4 808 aaKnown RBP22.61■■□□□ 1.21
VARS2-202ENST00000421263 REPS2Q8NFH8 660 aa22.61■■□□□ 1.21
VARS2-202ENST00000421263 OTUD7AQ8TE49 926 aaPredicted RBP22.61■■□□□ 1.21
VARS2-202ENST00000421263 ZNFX1Q9P2E3 1918 aaKnown RBP22.61■■□□□ 1.21
VARS2-202ENST00000421263 COL11A1P12107 1806 aaPredicted RBP22.6■■□□□ 1.21
VARS2-202ENST00000421263 FAM83BQ5T0W9 1011 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 IFNL3Q8IZI9 196 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 MKL1Q969V6 931 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 MAML3Q96JK9 1138 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 ZNF214Q9UL59 606 aaPredicted RBP22.6■■□□□ 1.21
VARS2-202ENST00000421263 DNAH12Q6ZR08 3092 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 LAMA3Q16787 3333 aa22.6■■□□□ 1.21
VARS2-202ENST00000421263 SALL3Q9BXA9 1300 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 F5H6K3 240 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 DNM1LO00429 736 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 STAT3P40763 770 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 KLRC3Q07444 240 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 STK11IPQ8N1F8 1099 aa22.59■■□□□ 1.21
VARS2-202ENST00000421263 SEC62Q99442 399 aaKnown RBP22.59■■□□□ 1.21
VARS2-202ENST00000421263 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
VARS2-202ENST00000421263 SOX1O00570 391 aaPredicted RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 SEPT4O43236 478 aa22.58■■□□□ 1.21
VARS2-202ENST00000421263 MAGEA10P43363 369 aaPredicted RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 TDO2P48775 406 aa22.58■■□□□ 1.21
VARS2-202ENST00000421263 RRP1P56182 461 aaKnown RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 SAMD1Q6SPF0 538 aaPredicted RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 ZNF444Q8N0Y2 327 aaPredicted RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 ZNF287Q9HBT7 754 aa22.58■■□□□ 1.21
VARS2-202ENST00000421263 DIS3Q9Y2L1 958 aaKnown RBP22.58■■□□□ 1.21
VARS2-202ENST00000421263 APPP05067 770 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 ZMYM1Q5SVZ6 1142 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 PRAMEF19Q5SWL8 479 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 ARRDC4Q8NCT1 418 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 MMP19Q99542 508 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 CLIP2Q9UDT6 1046 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 SYNPO2Q9UMS6 1093 aa22.57■■□□□ 1.2
VARS2-202ENST00000421263 RAD21O60216 631 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 NDUFB10O96000 172 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 MX1P20591 662 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 COPB2P35606 906 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 ZNF792Q3KQV3 632 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 PRPF38AQ8NAV1 312 aaKnown RBP22.56■■□□□ 1.2
VARS2-202ENST00000421263 NUP88Q99567 741 aaPredicted RBP22.56■■□□□ 1.2
VARS2-202ENST00000421263 SLF1Q9BQI6 1058 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 MTMR4Q9NYA4 1195 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 NRBP1Q9UHY1 535 aa22.56■■□□□ 1.2
VARS2-202ENST00000421263 ATP2A1O14983 1001 aa22.55■■□□□ 1.2
VARS2-202ENST00000421263 PRDM1O75626 825 aa22.55■■□□□ 1.2
VARS2-202ENST00000421263 FSD1Q9BTV5 496 aa22.55■■□□□ 1.2
VARS2-202ENST00000421263 NACAP1Q9BZK3 213 aa22.55■■□□□ 1.2
VARS2-202ENST00000421263 PGK2P07205 417 aa22.54■■□□□ 1.2
VARS2-202ENST00000421263 KCTD2Q14681 263 aa22.54■■□□□ 1.2
VARS2-202ENST00000421263 GJC2Q5T442 439 aaPredicted RBP22.54■■□□□ 1.2
VARS2-202ENST00000421263 NEDD1Q8NHV4 660 aa22.54■■□□□ 1.2
VARS2-202ENST00000421263 CEP95Q96GE4 821 aa22.54■■□□□ 1.2
VARS2-202ENST00000421263 LRCH3Q96II8 777 aa22.54■■□□□ 1.2
VARS2-202ENST00000421263 PLIN4Q96Q06 1357 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 LRIT3Q3SXY7 679 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 ANO1Q5XXA6 986 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 TDHQ8IZJ6 230 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 TINF2Q9BSI4 451 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 TEX13BQ9BXU2 312 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 RIPK3Q9Y572 518 aa22.53■■□□□ 1.2
VARS2-202ENST00000421263 SMCHD1A6NHR9 2005 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 FOXP2O15409 715 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 TTLL1O95922 423 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 PDE4BQ07343 736 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 PPARAQ07869 468 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 GPR153Q6NV75 609 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 GMCL1P1Q8NEA9 526 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 CRBNQ96SW2 442 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 MYH4Q9Y623 1939 aa22.52■■□□□ 1.2
VARS2-202ENST00000421263 ATN1P54259 1190 aaPredicted RBP22.51■■□□□ 1.19
VARS2-202ENST00000421263 HDAC1Q13547 482 aaPredicted RBP22.51■■□□□ 1.19
VARS2-202ENST00000421263 LRRC41Q15345 812 aa22.51■■□□□ 1.19
VARS2-202ENST00000421263 ANKRD45Q5TZF3 282 aa22.51■■□□□ 1.19
VARS2-202ENST00000421263 SLC39A5Q6ZMH5 540 aa22.51■■□□□ 1.19
VARS2-202ENST00000421263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.51■■□□□ 1.19
VARS2-202ENST00000421263 UBE2OQ9C0C9 1292 aaKnown RBP22.51■■□□□ 1.19
VARS2-202ENST00000421263 NAPBQ9H115 298 aa22.51■■□□□ 1.19
VARS2-202ENST00000421263 SLC38A10Q9HBR0 1119 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms