RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
DDX56-203ENST00000421223 MKRN1Q9UHC7 482 aaKnown RBP12.45□□□□□ -0.42
DDX56-203ENST00000421223 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
DDX56-203ENST00000421223 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
DDX56-203ENST00000421223 GTF2F1P35269 517 aaKnown RBP eCLIP12.45□□□□□ -0.422e-8■■■■■ 34.9
DDX56-203ENST00000421223 WWC2Q6AWC2 1192 aa12.45□□□□□ -0.42
DDX56-203ENST00000421223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX56-203ENST00000421223 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
DDX56-203ENST00000421223 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX56-203ENST00000421223 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
DDX56-203ENST00000421223 V9GYY5 206 aaPredicted RBP12.45□□□□□ -0.42
DDX56-203ENST00000421223 NID2Q14112 1375 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 FLT1P17948 1338 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 RGL2O15211 777 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 TCP10Q12799 353 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 NAA30Q147X3 362 aaPredicted RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 NEMFO60524 1076 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
DDX56-203ENST00000421223 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 BCORQ6W2J9 1755 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 RREB1Q92766 1687 aa12.44□□□□□ -0.42
DDX56-203ENST00000421223 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 SLFN14P0C7P3 912 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 CALML3P27482 149 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 ADKP55263 362 aaKnown RBP12.43□□□□□ -0.42
DDX56-203ENST00000421223 PPP4CP60510 307 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 SLC35G1Q2M3R5 365 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 EEF2KMTQ96G04 330 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 DAGLAQ9Y4D2 1042 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 MMP10P09238 476 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 IL17AQ16552 155 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
DDX56-203ENST00000421223 MLKLQ8NB16 471 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 PIGSQ96S52 555 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 GNAQP50148 359 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 GRM4Q14833 912 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 RGS22Q8NE09 1264 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 TNFRSF25Q93038 417 aa12.43□□□□□ -0.42
DDX56-203ENST00000421223 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
DDX56-203ENST00000421223 SEC63Q9UGP8 760 aaKnown RBP12.43□□□□□ -0.42
DDX56-203ENST00000421223 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 KCNA4P22459 653 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 CUL4BQ13620 913 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 MORC3Q14149 939 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 SMCO2A6NFE2 343 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 BMP15O95972 392 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 IL1R1P14778 569 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 PLCG2P16885 1265 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 TXLNAP40222 546 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 UBA7P41226 1012 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 STAT6P42226 847 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 RHBDL3P58872 404 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 DTHD1Q6ZMT9 781 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 COA7Q96BR5 231 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
DDX56-203ENST00000421223 IMPACTQ9P2X3 320 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 CTNND2Q9UQB3 1225 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 LAMB2P55268 1798 aa12.42□□□□□ -0.42
DDX56-203ENST00000421223 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
DDX56-203ENST00000421223 CCT6AP40227 531 aaKnown RBP12.41□□□□□ -0.42
DDX56-203ENST00000421223 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
DDX56-203ENST00000421223 MTERF4Q7Z6M4 381 aaKnown RBP12.41□□□□□ -0.42
DDX56-203ENST00000421223 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
DDX56-203ENST00000421223 PCDHAC2Q9Y5I4 1007 aa12.41□□□□□ -0.42
DDX56-203ENST00000421223 MYH6P13533 1939 aa12.41□□□□□ -0.42
DDX56-203ENST00000421223 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
DDX56-203ENST00000421223 AKR1B1P15121 316 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms