RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FAM83AQ86UY5 434 aa24.14■■□□□ 1.46
GPC1-202ENST00000420138 TRIM34Q9BYJ4 488 aa24.14■■□□□ 1.46
GPC1-202ENST00000420138 VEZTQ9HBM0 779 aa24.14■■□□□ 1.46
GPC1-202ENST00000420138 RNF181Q9P0P0 153 aa24.14■■□□□ 1.46
GPC1-202ENST00000420138 HERC5Q9UII4 1024 aaKnown RBP24.14■■□□□ 1.46
GPC1-202ENST00000420138 ADAMTS3O15072 1205 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 SPTLC2O15270 562 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 GDF11O95390 407 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 KRT2P35908 639 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 GPR162Q16538 588 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 LRSAM1Q6UWE0 723 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 GPKOWQ92917 476 aaPredicted RBP eCLIP24.14■■□□□ 1.45
GPC1-202ENST00000420138 TMEM39BQ9GZU3 492 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 KANSL2Q9H9L4 492 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 NYAP2Q9P242 653 aa24.14■■□□□ 1.45
GPC1-202ENST00000420138 MYH6P13533 1939 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 MYO1BO43795 1136 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 ME1P48163 572 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 SEPT2Q15019 361 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 TMEM179Q6ZVK1 233 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 MICALL2Q8IY33 904 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 BICD2Q8TD16 824 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 GOLPH3LQ9H4A5 285 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 RIOX1Q9H6W3 641 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 SH3GLB2Q9NR46 395 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 DACT1Q9NYF0 836 aa24.13■■□□□ 1.45
GPC1-202ENST00000420138 FRMPD2Q68DX3 1309 aaPredicted RBP24.13■■□□□ 1.45
GPC1-202ENST00000420138 FAM205CA6NFA0 338 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 NR1I2O75469 434 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 EEF2P13639 858 aaKnown RBP24.12■■□□□ 1.45
GPC1-202ENST00000420138 ABCB5Q2M3G0 1257 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 ASPRV1Q53RT3 343 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 PPP4R3BQ5MIZ7 849 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 AXDND1Q5T1B0 1012 aaPredicted RBP24.12■■□□□ 1.45
GPC1-202ENST00000420138 WWC2Q6AWC2 1192 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 ADALQ6DHV7 355 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 CNOT7Q9UIV1 285 aaKnown RBP24.12■■□□□ 1.45
GPC1-202ENST00000420138 ZNF543Q08ER8 600 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 NOM1Q5C9Z4 860 aaKnown RBP24.12■■□□□ 1.45
GPC1-202ENST00000420138 RILPL1Q5EBL4 403 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 GPC2Q8N158 579 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 UBA5Q9GZZ9 404 aa24.12■■□□□ 1.45
GPC1-202ENST00000420138 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.12■■□□□ 1.45
GPC1-202ENST00000420138 CCAR1Q8IX12 1150 aaKnown RBP24.11■■□□□ 1.45
GPC1-202ENST00000420138 CABP5Q9NP86 173 aa24.11■■□□□ 1.45
GPC1-202ENST00000420138 BARHL2Q9NY43 387 aa24.11■■□□□ 1.45
GPC1-202ENST00000420138 A0A1W2PQ27 194 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 A0A1W2PQ64 194 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 A0A1W2PQD8 194 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 STXBP3O00186 592 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 NLRP5P59047 1200 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 ATP2B2Q01814 1243 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 RBM26Q5T8P6 1007 aaKnown RBP24.1■■□□□ 1.45
GPC1-202ENST00000420138 ENGASEQ8NFI3 743 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.1■■□□□ 1.45
GPC1-202ENST00000420138 BAZ2BQ9UIF8 2168 aaKnown RBP24.1■■□□□ 1.45
GPC1-202ENST00000420138 TBC1D12O60347 775 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 PPP6R2O75170 966 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 GH2P01242 217 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 SNW1Q13573 536 aaKnown RBP24.1■■□□□ 1.45
GPC1-202ENST00000420138 C9orf131Q5VYM1 1079 aa24.1■■□□□ 1.45
GPC1-202ENST00000420138 M0R2N6 131 aa24.09■■□□□ 1.45
GPC1-202ENST00000420138 MAP3K10Q02779 954 aa24.09■■□□□ 1.45
GPC1-202ENST00000420138 ICA1Q05084 483 aa24.09■■□□□ 1.45
GPC1-202ENST00000420138 SAMD7Q7Z3H4 446 aa24.09■■□□□ 1.45
GPC1-202ENST00000420138 DDX19AQ9NUU7 478 aaKnown RBP24.09■■□□□ 1.45
GPC1-202ENST00000420138 PCDHB6Q9Y5E3 794 aa24.09■■□□□ 1.45
GPC1-202ENST00000420138 LETM1O95202 739 aaPredicted RBP24.08■■□□□ 1.45
GPC1-202ENST00000420138 MARCKSP29966 332 aaPredicted RBP24.08■■□□□ 1.45
GPC1-202ENST00000420138 PIGSQ96S52 555 aa24.08■■□□□ 1.45
GPC1-202ENST00000420138 BRMS1Q9HCU9 246 aa24.08■■□□□ 1.45
GPC1-202ENST00000420138 GPCPD1Q9NPB8 672 aa24.08■■□□□ 1.45
GPC1-202ENST00000420138 H7C1D1 291 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 TTBK2Q6IQ55 1244 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 HEATR3Q7Z4Q2 680 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 RRP36Q96EU6 259 aaKnown RBP24.07■■□□□ 1.44
GPC1-202ENST00000420138 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
GPC1-202ENST00000420138 ASTN2O75129 1339 aaPredicted RBP24.07■■□□□ 1.44
GPC1-202ENST00000420138 WNT7AO00755 349 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 CALML3P27482 149 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 TBC1D10BQ4KMP7 808 aaPredicted RBP24.07■■□□□ 1.44
GPC1-202ENST00000420138 FAM177A1Q8N128 213 aaPredicted RBP24.07■■□□□ 1.44
GPC1-202ENST00000420138 TEPSINQ96N21 525 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 FUCA2Q9BTY2 467 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 RBSNQ9H1K0 784 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 NUP62CLQ9H1M0 184 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 CLSTN2Q9H4D0 955 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 VAT1LQ9HCJ6 419 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 PCDHA4Q9UN74 947 aa24.07■■□□□ 1.44
GPC1-202ENST00000420138 RASA3Q14644 834 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 GPATCH4Q5T3I0 446 aaKnown RBP24.06■■□□□ 1.44
GPC1-202ENST00000420138 HOMER1Q86YM7 354 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 BLIDQ8IZY5 108 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 FSIP1Q8NA03 581 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 DAGLBQ8NCG7 672 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 MRPS27Q92552 414 aaKnown RBP24.06■■□□□ 1.44
GPC1-202ENST00000420138 GPRC5DQ9NZD1 345 aa24.06■■□□□ 1.44
GPC1-202ENST00000420138 A0A1W2PRG0 241 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 GRIN3BO60391 1043 aa24.05■■□□□ 1.44
GPC1-202ENST00000420138 KIF4BQ2VIQ3 1234 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms