RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 EVI5LQ96CN4 794 aa16.32■□□□□ 0.2
SEC22C-204ENST00000416880 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
SEC22C-204ENST00000416880 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
SEC22C-204ENST00000416880 FLRT1Q9NZU1 646 aa16.32■□□□□ 0.2
SEC22C-204ENST00000416880 PPP1R9AQ9ULJ8 1098 aa16.32■□□□□ 0.2
SEC22C-204ENST00000416880 FCER1AP12319 257 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
SEC22C-204ENST00000416880 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 NCAPG2Q86XI2 1143 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 NPLOC4Q8TAT6 608 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
SEC22C-204ENST00000416880 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
SEC22C-204ENST00000416880 NAPBQ9H115 298 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
SEC22C-204ENST00000416880 GREB1LQ9C091 1923 aaPredicted RBP16.3■□□□□ 0.2
SEC22C-204ENST00000416880 IGKV6D-41A0A0C4DH26 115 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 A0A1W2PPC1 479 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 F5H6K3 240 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 VWA5AO00534 786 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 STAT3P40763 770 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
SEC22C-204ENST00000416880 KLRC3Q07444 240 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
SEC22C-204ENST00000416880 PRO3102Q9H379 93 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
SEC22C-204ENST00000416880 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
SEC22C-204ENST00000416880 RAD21O60216 631 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 COL6A1P12109 1028 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 PDE1AP54750 535 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 FAM83BQ5T0W9 1011 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 NEDD1Q8NHV4 660 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
SEC22C-204ENST00000416880 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 MTMR4Q9NYA4 1195 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
SEC22C-204ENST00000416880 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
SEC22C-204ENST00000416880 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
SEC22C-204ENST00000416880 COBLO75128 1261 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 TTLL1O95922 423 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 TSPY3P0CV98 308 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 TSPY8P0CW00 308 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 FDX1P10109 184 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 CYBAP13498 195 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 CNGA1P29973 690 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 CYP2C19P33261 490 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 PPARAQ07869 468 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 KCTD2Q14681 263 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
SEC22C-204ENST00000416880 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
SEC22C-204ENST00000416880 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 NDUFB10O96000 172 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 ALX1Q15699 326 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
SEC22C-204ENST00000416880 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 MMP19Q99542 508 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
SEC22C-204ENST00000416880 ZNF214Q9UL59 606 aaPredicted RBP16.27■□□□□ 0.2
SEC22C-204ENST00000416880 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
SEC22C-204ENST00000416880 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 SEPT4O43236 478 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 ZBED4O75132 1171 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 PRDM1O75626 825 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 BMP8BP34820 402 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 TFAP4Q01664 338 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
SEC22C-204ENST00000416880 PFASO15067 1338 aa16.25■□□□□ 0.19
SEC22C-204ENST00000416880 TRIOBPQ9H2D6 2365 aa16.25■□□□□ 0.19
SEC22C-204ENST00000416880 DNM1LO00429 736 aa16.25■□□□□ 0.19
SEC22C-204ENST00000416880 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
SEC22C-204ENST00000416880 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
SEC22C-204ENST00000416880 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
SEC22C-204ENST00000416880 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
SEC22C-204ENST00000416880 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
SEC22C-204ENST00000416880 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 OAZ1P54368 228 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC22C-204ENST00000416880 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
SEC22C-204ENST00000416880 GDF15Q99988 308 aa16.24■□□□□ 0.19
SEC22C-204ENST00000416880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC22C-204ENST00000416880 PLA2G6O60733 806 aa16.23■□□□□ 0.19
SEC22C-204ENST00000416880 FGRP09769 529 aa16.23■□□□□ 0.19
SEC22C-204ENST00000416880 BMP3P12645 472 aa16.23■□□□□ 0.19
SEC22C-204ENST00000416880 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms