RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 DDX20Q9UHI6 824 aaKnown RBP17.61■□□□□ 0.41
CBX3-203ENST00000409747 M0R2C6 588 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 CNGA1P29973 690 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 COPB2P35606 906 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 PFASO15067 1338 aa17.6■□□□□ 0.41
CBX3-203ENST00000409747 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
CBX3-203ENST00000409747 COL6A1P12109 1028 aa17.6■□□□□ 0.41
CBX3-203ENST00000409747 FCER1AP12319 257 aa17.6■□□□□ 0.41
CBX3-203ENST00000409747 CYP2C19P33261 490 aa17.6■□□□□ 0.41
CBX3-203ENST00000409747 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
CBX3-203ENST00000409747 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
CBX3-203ENST00000409747 COL11A1P12107 1806 aaPredicted RBP17.59■□□□□ 0.41
CBX3-203ENST00000409747 IGHA2P01877 340 aa17.59■□□□□ 0.41
CBX3-203ENST00000409747 SLC3A2P08195 630 aaKnown RBP17.59■□□□□ 0.41
CBX3-203ENST00000409747 CYBAP13498 195 aa17.59■□□□□ 0.41
CBX3-203ENST00000409747 TMEM132BQ14DG7 1078 aa17.59■□□□□ 0.41
CBX3-203ENST00000409747 FAM83BQ5T0W9 1011 aa17.59■□□□□ 0.41
CBX3-203ENST00000409747 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
CBX3-203ENST00000409747 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
CBX3-203ENST00000409747 VWA5AO00534 786 aa17.58■□□□□ 0.41
CBX3-203ENST00000409747 PDE4BQ07343 736 aa17.58■□□□□ 0.41
CBX3-203ENST00000409747 RIOX2Q8IUF8 465 aa17.58■□□□□ 0.41
CBX3-203ENST00000409747 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.41
CBX3-203ENST00000409747 STK11IPQ8N1F8 1099 aa17.58■□□□□ 0.41
CBX3-203ENST00000409747 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
CBX3-203ENST00000409747 MMP19Q99542 508 aa17.58■□□□□ 0.4
CBX3-203ENST00000409747 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
CBX3-203ENST00000409747 NAPBQ9H115 298 aa17.58■□□□□ 0.4
CBX3-203ENST00000409747 FBXO28Q9NVF7 368 aa17.58■□□□□ 0.4
CBX3-203ENST00000409747 DNM1LO00429 736 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 COBLO75128 1261 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 BMP8BP34820 402 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 STAT3P40763 770 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 KCTD2Q14681 263 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
CBX3-203ENST00000409747 PLIN4Q96Q06 1357 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
CBX3-203ENST00000409747 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 F5H6K3 240 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 SEPT4O43236 478 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 KLRC3Q07444 240 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 ARRDC4Q8NCT1 418 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 TRPV1Q8NER1 839 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 MAML3Q96JK9 1138 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 GDF15Q99988 308 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
CBX3-203ENST00000409747 ZNF214Q9UL59 606 aaPredicted RBP17.56■□□□□ 0.4
CBX3-203ENST00000409747 DNAH12Q6ZR08 3092 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 TTLL1O95922 423 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 NDUFB10O96000 172 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 AAMPQ13685 434 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 PPP4R3BQ5MIZ7 849 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 SEC62Q99442 399 aaKnown RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 TEX13BQ9BXU2 312 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 DIS3Q9Y2L1 958 aaKnown RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 SALL3Q9BXA9 1300 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 PRDM1O75626 825 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 MKL1Q969V6 931 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 CEP95Q96GE4 821 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 SENP6Q9GZR1 1112 aaPredicted RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 MTMR4Q9NYA4 1195 aa17.55■□□□□ 0.4
CBX3-203ENST00000409747 CTDP1Q9Y5B0 961 aaPredicted RBP17.55■□□□□ 0.4
CBX3-203ENST00000409747 SZT2Q5T011 3432 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 KBTBD13C9JR72 458 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 SYN1P17600 705 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 PPARAQ07869 468 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 LRRC26Q2I0M4 334 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
CBX3-203ENST00000409747 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
CBX3-203ENST00000409747 ZNFX1Q9P2E3 1918 aaKnown RBP17.54■□□□□ 0.4
CBX3-203ENST00000409747 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
CBX3-203ENST00000409747 PLXNA1Q9UIW2 1896 aa17.53■□□□□ 0.4
CBX3-203ENST00000409747 ZBED4O75132 1171 aa17.52■□□□□ 0.4
CBX3-203ENST00000409747 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.4
CBX3-203ENST00000409747 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
CBX3-203ENST00000409747 TICAM2Q86XR7 235 aa17.52■□□□□ 0.4
CBX3-203ENST00000409747 FEM1BQ9UK73 627 aa17.52■□□□□ 0.4
CBX3-203ENST00000409747 ATP2A1O14983 1001 aa17.52■□□□□ 0.39
CBX3-203ENST00000409747 ZNF792Q3KQV3 632 aa17.52■□□□□ 0.39
CBX3-203ENST00000409747 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.39
CBX3-203ENST00000409747 TINF2Q9BSI4 451 aa17.52■□□□□ 0.39
CBX3-203ENST00000409747 PGK2P07205 417 aa17.51■□□□□ 0.39
CBX3-203ENST00000409747 FDX1P10109 184 aa17.51■□□□□ 0.39
CBX3-203ENST00000409747 PDE1AP54750 535 aa17.51■□□□□ 0.39
CBX3-203ENST00000409747 TFAP4Q01664 338 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms