RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 DNM1LO00429 736 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 COBLO75128 1261 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 IGHA2P01877 340 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 GNAT2P19087 354 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
SNRNP25-203ENST00000397876 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 GPAA1O43292 621 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 RASA1P20936 1047 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 COPB2P35606 906 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 TDO2P48775 406 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 STK11IPQ8N1F8 1099 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 FBXO28Q9NVF7 368 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
SNRNP25-203ENST00000397876 ERC2O15083 957 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 SEPT4O43236 478 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 KCTD2Q14681 263 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 TDHQ8IZJ6 230 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 ARRDC4Q8NCT1 418 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 MMP19Q99542 508 aa17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 EPB41L4AQ9HCS5 686 aaPredicted RBP17.07■□□□□ 0.32
SNRNP25-203ENST00000397876 KBTBD13C9JR72 458 aa17.06■□□□□ 0.32
SNRNP25-203ENST00000397876 M0R2C6 588 aa17.06■□□□□ 0.32
SNRNP25-203ENST00000397876 VWA5AO00534 786 aa17.06■□□□□ 0.32
SNRNP25-203ENST00000397876 APPP05067 770 aa17.06■□□□□ 0.32
SNRNP25-203ENST00000397876 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
SNRNP25-203ENST00000397876 STAT3P40763 770 aa17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 NACAP1Q9BZK3 213 aa17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
SNRNP25-203ENST00000397876 F5H6K3 240 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 NDUFB10O96000 172 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 KLRC3Q07444 240 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 ZNF444Q8N0Y2 327 aaPredicted RBP17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
SNRNP25-203ENST00000397876 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 PRDM1O75626 825 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 PGK2P07205 417 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 RTP1P59025 263 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 IFNL3Q8IZI9 196 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 PI4K2BQ8TCG2 481 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 LAMA3Q16787 3333 aa17.03■□□□□ 0.32
SNRNP25-203ENST00000397876 MYH4Q9Y623 1939 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 PLXNA1Q9UIW2 1896 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 MX1P20591 662 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 NAPBQ9H115 298 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 SYNPO2Q9UMS6 1093 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 ATP11BQ9Y2G3 1177 aa17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.32
SNRNP25-203ENST00000397876 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.31
SNRNP25-203ENST00000397876 ZNFX1Q9P2E3 1918 aaKnown RBP17.02■□□□□ 0.31
SNRNP25-203ENST00000397876 ZBED4O75132 1171 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 TTLL1O95922 423 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 RARBP10826 455 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 PDE4BQ07343 736 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 LRRC41Q15345 812 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 ZNF792Q3KQV3 632 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 XPNPEP3Q9NQH7 507 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
SNRNP25-203ENST00000397876 TSPY3P0CV98 308 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms