RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
IFT140-202ENST00000397417 ZNF609O15014 1411 aa12.55□□□□□ -0.4
IFT140-202ENST00000397417 CUTAO60888 179 aa12.55□□□□□ -0.4
IFT140-202ENST00000397417 CDK8P49336 464 aa12.55□□□□□ -0.4
IFT140-202ENST00000397417 CABP7Q86V35 215 aa12.55□□□□□ -0.4
IFT140-202ENST00000397417 CCP110O43303 1012 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 KIF20AO95235 890 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 GH2P01242 217 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 LRRC41Q15345 812 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
IFT140-202ENST00000397417 TAX1BP1Q86VP1 789 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 FAM207AQ9NSI2 230 aaPredicted RBP12.54□□□□□ -0.4
IFT140-202ENST00000397417 H7C1D1 291 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 GSDMDP57764 484 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 ENAHQ8N8S7 591 aaPredicted RBP12.54□□□□□ -0.4
IFT140-202ENST00000397417 IGSF22Q8N9C0 903 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 TAF4BQ92750 862 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 R3HDM1Q15032 1099 aaKnown RBP12.54□□□□□ -0.4
IFT140-202ENST00000397417 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
IFT140-202ENST00000397417 TTC14Q96N46 770 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
IFT140-202ENST00000397417 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 TRERF1Q96PN7 1200 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
IFT140-202ENST00000397417 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
IFT140-202ENST00000397417 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
IFT140-202ENST00000397417 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
IFT140-202ENST00000397417 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
IFT140-202ENST00000397417 USP17L15C9J2P7 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L11C9JVI0 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L18D6R9N7 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L22D6RA61 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L19D6RCP7 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L20D6RJB6 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 NTSR2O95665 410 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 NF2P35240 595 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 ZNF75DP51815 510 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L24Q0WX57 530 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 SEPT2Q15019 361 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 CEP95Q96GE4 821 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 PCDHA12Q9UN75 941 aa12.52□□□□□ -0.4
IFT140-202ENST00000397417 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 PP2D1A8MPX8 630 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 PHACTR2O75167 634 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
IFT140-202ENST00000397417 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
IFT140-202ENST00000397417 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
IFT140-202ENST00000397417 ZNF569Q5MCW4 686 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 ATP1A3P13637 1013 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
IFT140-202ENST00000397417 CTR9Q6PD62 1173 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
IFT140-202ENST00000397417 MST1RQ04912 1400 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 SYNRGQ9UMZ2 1314 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 RESTQ13127 1097 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 VPS72Q15906 364 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
IFT140-202ENST00000397417 CCDC42Q96M95 316 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 FOXN1O15353 648 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 PLCD1P51178 756 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 LUC7L2Q9Y383 392 aaKnown RBP12.51□□□□□ -0.41
IFT140-202ENST00000397417 JCADQ9P266 1359 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
IFT140-202ENST00000397417 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 KRT9P35527 623 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 SMCR8Q8TEV9 937 aaPredicted RBP12.51□□□□□ -0.41
IFT140-202ENST00000397417 NELFBQ8WX92 580 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 GJA10Q969M2 543 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 RHOXF2Q9BQY4 288 aa12.51□□□□□ -0.41
IFT140-202ENST00000397417 GCNT3O95395 438 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 MCM6Q14566 821 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 MYCT1Q8N699 235 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 KIF28PB7ZC32 967 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
IFT140-202ENST00000397417 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 TMEM260Q9NX78 707 aa12.5□□□□□ -0.41
IFT140-202ENST00000397417 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms