RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 FANCLQ9NW38 375 aa15.92■□□□□ 0.14
SNCA-204ENST00000394989 HOOK1Q9UJC3 728 aaKnown RBP15.92■□□□□ 0.14
SNCA-204ENST00000394989 MTMR7Q9Y216 660 aa15.92■□□□□ 0.14
SNCA-204ENST00000394989 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
SNCA-204ENST00000394989 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
SNCA-204ENST00000394989 TPM4P67936 248 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 FMR1Q06787 632 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNCA-204ENST00000394989 TBC1D22AQ8WUA7 517 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 EYA3Q99504 573 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 DAGLAQ9Y4D2 1042 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
SNCA-204ENST00000394989 NEMFO60524 1076 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 BMP15O95972 392 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 GOLGA8HP0CJ92 632 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 SKILP12757 684 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 BLIDQ8IZY5 108 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 CERS5Q8N5B7 392 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 RASGRP4Q8TDF6 673 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 SMARCE1Q969G3 411 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 SH3GLB2Q9NR46 395 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 USP27XA6NNY8 438 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 RIOK3O14730 519 aaKnown RBP15.91■□□□□ 0.14
SNCA-204ENST00000394989 CASP1P29466 404 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 TRAPPC10P48553 1259 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 NAA30Q147X3 362 aaPredicted RBP15.91■□□□□ 0.14
SNCA-204ENST00000394989 CCDC178Q5BJE1 867 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 ARMCX5Q6P1M9 558 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 TMC6Q7Z403 805 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 CPVLQ9H3G5 476 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 PCDHA4Q9UN74 947 aa15.91■□□□□ 0.14
SNCA-204ENST00000394989 PLCG2P16885 1265 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 MCM7P33993 719 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 C16orf45Q96MC5 204 aaPredicted RBP15.9■□□□□ 0.14
SNCA-204ENST00000394989 SLFN14P0C7P3 912 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 KANK3Q6NY19 840 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 C4orf32Q8N8J7 132 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 NEDD1Q8NHV4 660 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 QSER1Q2KHR3 1735 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 ADAMTSL1Q8N6G6 1762 aa15.9■□□□□ 0.14
SNCA-204ENST00000394989 PAGE5Q96GU1 130 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 MXD3Q9BW11 206 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 CALML3P27482 149 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 GSDMDP57764 484 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 CEP95Q96GE4 821 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 ZNF287Q9HBT7 754 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 STXBP3O00186 592 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 AFMP43652 599 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 NOVP48745 357 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 GNAQP50148 359 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 E2F4Q16254 413 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 SLF2Q8IX21 1173 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 MLKLQ8NB16 471 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 COA1Q9GZY4 146 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 INTS13Q9NVM9 706 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 BARHL2Q9NY43 387 aa15.89■□□□□ 0.13
SNCA-204ENST00000394989 HSP90AA4PQ58FG1 418 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 F8W031 263 aaPredicted RBP15.88■□□□□ 0.13
SNCA-204ENST00000394989 UBASH3AP57075 661 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 PTPN21Q16825 1174 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 TRMT44Q8IYL2 757 aaKnown RBP15.88■□□□□ 0.13
SNCA-204ENST00000394989 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
SNCA-204ENST00000394989 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
SNCA-204ENST00000394989 ZNF18P17022 549 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNCA-204ENST00000394989 DPYDQ12882 1025 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 TMEM232C9JQI7 657 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 SERPINC1P01008 464 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 ZNF592Q92610 1267 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 NPR1P16066 1061 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 GABPAQ06546 454 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 PICALMQ13492 652 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 DAGLBQ8NCG7 672 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 MTRQ99707 1265 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
SNCA-204ENST00000394989 PLSCR1O15162 318 aa15.86■□□□□ 0.13
SNCA-204ENST00000394989 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
SNCA-204ENST00000394989 DOK7Q18PE1 504 aa15.86■□□□□ 0.13
SNCA-204ENST00000394989 ENOX1Q8TC92 643 aaKnown RBP15.86■□□□□ 0.13
SNCA-204ENST00000394989 STAMQ92783 540 aa15.86■□□□□ 0.13
SNCA-204ENST00000394989 CFAP100Q494V2 611 aa15.86■□□□□ 0.13
SNCA-204ENST00000394989 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
SNCA-204ENST00000394989 MYO1BO43795 1136 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 MMP10P09238 476 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 CDC25AP30304 524 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 TPD52L1Q16890 204 aaPredicted RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 TNNT1P13805 278 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms