RNA–Protein interactions for RNA: ENST00000394810.2

SYNPO2L-202, Transcript of synaptopodin 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-202ENST00000394810 MMP1P03956 469 aa16.71■□□□□ 0.27
SYNPO2L-202ENST00000394810 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
SYNPO2L-202ENST00000394810 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
SYNPO2L-202ENST00000394810 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
SYNPO2L-202ENST00000394810 PPP6R2O75170 966 aa16.71■□□□□ 0.26
SYNPO2L-202ENST00000394810 ERLIN1O75477 346 aa16.71■□□□□ 0.26
SYNPO2L-202ENST00000394810 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.71■□□□□ 0.26
SYNPO2L-202ENST00000394810 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.26
SYNPO2L-202ENST00000394810 TRMT1Q9NXH9 659 aaKnown RBP16.71■□□□□ 0.26
SYNPO2L-202ENST00000394810 CYP2D6P10635 497 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 GAS7O60861 476 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 TNNT1P13805 278 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 HS1BP3Q53T59 392 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 SLIT3O75094 1523 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 TRAF5O00463 557 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 ORC4O43929 436 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 SKILP12757 684 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 CASQ1P31415 396 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 LONP1P36776 959 aaKnown RBP16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 TMEM63CQ9P1W3 806 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 NEDD4P46934 1319 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 PTGDRQ13258 359 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 UBXN4Q92575 508 aa16.7■□□□□ 0.26
SYNPO2L-202ENST00000394810 USP17L2Q6R6M4 530 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 ALS2CR12Q96Q35 445 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 EHBP1Q8NDI1 1231 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 UBXN1Q04323 297 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 KCTD1Q719H9 257 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 RBSNQ9H1K0 784 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 KIAA1468Q9P260 1216 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 PAK1Q13153 545 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 HERC4Q5GLZ8 1057 aaPredicted RBP16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 PIGSQ96S52 555 aa16.69■□□□□ 0.26
SYNPO2L-202ENST00000394810 PHACTR2O75167 634 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 STK36Q9NRP7 1315 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 STAT2P52630 851 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 CASP7P55210 303 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 DDX25Q9UHL0 483 aaKnown RBP16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 SSR1P43307 286 aaKnown RBP16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 PRR16Q569H4 304 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
SYNPO2L-202ENST00000394810 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 CETN3O15182 167 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 PAFAH1B1P43034 410 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 CACNB3P54284 484 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 FMNL3Q8IVF7 1028 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 FRMD4BQ9Y2L6 1034 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 C12orf60Q5U649 245 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 TRIML1Q8N9V2 468 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 DCAF4Q8WV16 495 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
SYNPO2L-202ENST00000394810 NR1I2O75469 434 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 TECP42680 631 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 ENAHQ8N8S7 591 aaPredicted RBP16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 VTI1AQ96AJ9 217 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 CBX8Q9HC52 389 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
SYNPO2L-202ENST00000394810 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms