RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ENAHQ8N8S7 591 aaPredicted RBP8.08□□□□□ -1.12
RTN4-205ENST00000394609 SUPT20HQ8NEM7 779 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 NUP133Q8WUM0 1156 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 LMBRD1Q9NUN5 540 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 USP40Q9NVE5 1235 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 PIM2Q9P1W9 311 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 LAMA4Q16363 1823 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 UTRNP46939 3433 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 FLT1P17948 1338 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 GOLGA8AA7E2F4 631 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 ORC4O43929 436 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 CRKP46108 304 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 RBM5P52756 815 aaKnown RBP eCLIP8.07□□□□□ -1.12
RTN4-205ENST00000394609 TGFB2P61812 414 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 DNM1Q05193 864 aaKnown RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 SEC23AQ15436 765 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 UTP14CQ5TAP6 766 aaKnown RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 OTUD7BQ6GQQ9 843 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 APOBEC3HQ6NTF7 200 aaKnown RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 BRICD5Q6PL45 260 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 IQCA1Q86XH1 822 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 CERS3Q8IU89 383 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 AMOTL1Q8IY63 956 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 PHKBQ93100 1093 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 TEKT1Q969V4 418 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 AAASQ9NRG9 546 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 GJB4Q9NTQ9 266 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 FAM217BQ9NTX9 383 aaPredicted RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 ORC3Q9UBD5 711 aaPredicted RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 PRDM4Q9UKN5 801 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 CNPY2Q9Y2B0 182 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 DDX49Q9Y6V7 483 aaKnown RBP8.07□□□□□ -1.12
RTN4-205ENST00000394609 SNED1Q8TER0 1413 aa8.07□□□□□ -1.12
RTN4-205ENST00000394609 TSPY2A6NKD2 308 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 WDHD1O75717 1129 aaPredicted RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 RAD17O75943 681 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 PCP11498 1178 aaKnown RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 CACNB3P54284 484 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 TFAP4Q01664 338 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 CTC1Q2NKJ3 1217 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 IFIT1BQ5T764 474 aaKnown RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 CDC42EP5Q6NZY7 148 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 USP48Q86UV5 1035 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 ZNF654Q8IZM8 581 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 TMTC2Q8N394 836 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 FAM160A2Q8N612 972 aaPredicted RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 CHMP4CQ96CF2 233 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 DDX4Q9NQI0 724 aaKnown RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 ATP6V1DQ9Y5K8 247 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 CHD4Q14839 1912 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 UBE2Q2LH0YL09 131 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 FIBPO43427 364 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 AVPP01185 164 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 NFIAQ12857 509 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 RTN1Q16799 776 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 DALRD3Q5D0E6 543 aaKnown RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 AIFM3Q96NN9 605 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 PSMD1Q99460 953 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
RTN4-205ENST00000394609 KIF3AQ9Y496 699 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 QSER1Q2KHR3 1735 aa8.06□□□□□ -1.12
RTN4-205ENST00000394609 BAZ2AQ9UIF9 1905 aaKnown RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 GADD45BO75293 160 aaPredicted RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 TSPY3P0CV98 308 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 TSPY8P0CW00 308 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 IARSP41252 1262 aaKnown RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 CDK8P49336 464 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 TCP10Q12799 353 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 NTRK3Q16288 839 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 CPLX2Q6PUV4 134 aaKnown RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 ZFPM1Q8IX07 1006 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 ZNF444Q8N0Y2 327 aaPredicted RBP8.05□□□□□ -1.12
RTN4-205ENST00000394609 FANCBQ8NB91 859 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 GPT2Q8TD30 523 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 ZDHHC15Q96MV8 337 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 MTA3Q9BTC8 594 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 IL17RBQ9NRM6 502 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 TOR4AQ9NXH8 423 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 BCS1LQ9Y276 419 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
RTN4-205ENST00000394609 PSMD14O00487 310 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 CDKL5O76039 1030 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 RASA1P20936 1047 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 FKBP1AP62942 108 aaKnown RBP8.04□□□□□ -1.12
RTN4-205ENST00000394609 RESTQ13127 1097 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 SLC26A6Q9BXS9 759 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 MAST2Q6P0Q8 1798 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 hCG_1642624A0A1W2PR95 340 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms