RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 CCT5P48643 541 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 STX17P56962 302 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 CSRNP2Q9H175 543 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 EHD4Q9H223 541 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 CLGNO14967 610 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 CUTAO60888 179 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 RNF40O75150 1001 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 ERLIN2O94905 339 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 BMP6P22004 513 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 CDC25AP30304 524 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 KCNJ6P48051 423 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 ZNF569Q5MCW4 686 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 RESP18Q5W5W9 173 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 TMEM139Q8IV31 216 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 VSTM4Q8IW00 320 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 SMYD4Q8IYR2 804 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 DYNLL2Q96FJ2 89 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 BSDC1Q9NW68 430 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 MCM9Q9NXL9 1143 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 DEXIO95424 95 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 SRGAP1Q7Z6B7 1085 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-204ENST00000394164 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
PSEN1-204ENST00000394164 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 PNPLA7Q6ZV29 1317 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 ERLIN1O75477 346 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 ZMYND10O75800 440 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 HIBADHP31937 336 aaKnown RBP11.24□□□□□ -0.61
PSEN1-204ENST00000394164 WASF1Q92558 559 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 SAP30BPQ9UHR5 308 aaKnown RBP11.24□□□□□ -0.61
PSEN1-204ENST00000394164 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-204ENST00000394164 L1RE1Q9UN81 338 aa11.24□□□□□ -0.61
PSEN1-204ENST00000394164 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 PPP6R2O75170 966 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 GRIK5Q16478 980 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 EFCAB13Q8IY85 973 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 CPVLQ9H3G5 476 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 COL16A1Q07092 1604 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 UTRNP46939 3433 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 SRCAPQ6ZRS2 3230 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 CBFA2T2O43439 604 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 GSPT2Q8IYD1 628 aaKnown RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 SLC44A5Q8NCS7 719 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 NSUN4Q96CB9 384 aaKnown RBP11.23□□□□□ -0.61
PSEN1-204ENST00000394164 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
PSEN1-204ENST00000394164 C4AP0C0L4 1744 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 C4BP0C0L5 1744 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 MYL5Q02045 173 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 FMR1Q06787 632 aaKnown RBP eCLIP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 NFIXQ14938 502 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 SEC23AQ15436 765 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 NOA1Q8NC60 698 aaKnown RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 FBXO2Q9UK22 296 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 ABL1P00519 1130 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 HNRNPH1P31943 449 aaKnown RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 ARHGEF1Q92888 912 aaKnown RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 PLIN2Q99541 437 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 A0A087WUV0 522 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 A0A087X0B3 334 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 MCM7P33993 719 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 PPARDQ03181 441 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 POSTNQ15063 836 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 PKN1Q16512 942 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 BLZF1Q9H2G9 400 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 POLD4Q9HCU8 107 aa11.22□□□□□ -0.61
PSEN1-204ENST00000394164 DCP1AQ9NPI6 582 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-204ENST00000394164 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 USP5P45974 858 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms