RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 MTMR10Q9NXD2 777 aa21.49■■□□□ 1.03
RPUSD3-201ENST00000383820 STXBP5LQ9Y2K9 1186 aa21.49■■□□□ 1.03
RPUSD3-201ENST00000383820 CTR9Q6PD62 1173 aa21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 SLC39A5Q6ZMH5 540 aa21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 Q7L0L9 218 aa21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 RIOX2Q8IUF8 465 aa21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 ARPP21Q9UBL0 812 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
RPUSD3-201ENST00000383820 ZNFX1Q9P2E3 1918 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 SMIM22K7EJ46 135 aa21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 COPB2P35606 906 aa21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 PUS7LQ9H0K6 701 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 DIS3Q9Y2L1 958 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 COL11A1P12107 1806 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-201ENST00000383820 CHGBP05060 677 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 SNX17Q15036 470 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 SBK1Q52WX2 424 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 FAM109BQ6ICB4 259 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 GIMAP6Q6P9H5 292 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 MMP19Q99542 508 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 PPP1R9AQ9ULJ8 1098 aa21.46■■□□□ 1.03
RPUSD3-201ENST00000383820 LTBP2Q14767 1821 aa21.45■■□□□ 1.03
RPUSD3-201ENST00000383820 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 VWA5AO00534 786 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 STAT3P40763 770 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 KCTD2Q14681 263 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 LRRC41Q15345 812 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 C1orf53Q5VUE5 145 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 ANO1Q5XXA6 986 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 SAMD1Q6SPF0 538 aaPredicted RBP21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 ECHDC1Q9NTX5 307 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 FBXO28Q9NVF7 368 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
RPUSD3-201ENST00000383820 DLL1O00548 723 aa21.44■■□□□ 1.02
RPUSD3-201ENST00000383820 PRAMEF19Q5SWL8 479 aa21.44■■□□□ 1.02
RPUSD3-201ENST00000383820 STRBPQ96SI9 672 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-201ENST00000383820 ZNF214Q9UL59 606 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-201ENST00000383820 ROBO3Q96MS0 1386 aa21.44■■□□□ 1.02
RPUSD3-201ENST00000383820 POTEB2H3BUK9 544 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 ZNF792Q3KQV3 632 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 FAM47AQ5JRC9 791 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 KBTBD3Q8NAB2 608 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 REPS2Q8NFH8 660 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 TINF2Q9BSI4 451 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 NYAP2Q9P242 653 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 PLXNA1Q9UIW2 1896 aa21.43■■□□□ 1.02
RPUSD3-201ENST00000383820 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 RARBP10826 455 aa21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 COL6A3P12111 3177 aa21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 FAM83BQ5T0W9 1011 aa21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 DNAH12Q6ZR08 3092 aa21.42■■□□□ 1.02
RPUSD3-201ENST00000383820 GSG1L2A8MUP6 293 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 MYCNP04198 464 aaPredicted RBP21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 RASA1P20936 1047 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 TRIM60Q495X7 471 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 MSL3Q8N5Y2 521 aaKnown RBP21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 APPBP2Q92624 585 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 MKNK2Q9HBH9 465 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 XPNPEP3Q9NQH7 507 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 PHF24Q9UPV7 400 aa21.41■■□□□ 1.02
RPUSD3-201ENST00000383820 RAD21O60216 631 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 PGK2P07205 417 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 ZFYP08048 801 aaPredicted RBP21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 RNF180Q86T96 592 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 SLF1Q9BQI6 1058 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 PDLIM7Q9NR12 457 aa21.4■■□□□ 1.02
RPUSD3-201ENST00000383820 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.02
RPUSD3-201ENST00000383820 F5H6K3 240 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 AKR1A1P14550 325 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 GNAT2P19087 354 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 KLRC3Q07444 240 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 C20orf194Q5TEA3 1177 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 PRPF38AQ8NAV1 312 aaKnown RBP21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 OSBP2Q969R2 916 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 FERMT2Q96AC1 680 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 DCTPP1Q9H773 170 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 SYNPO2Q9UMS6 1093 aa21.39■■□□□ 1.01
RPUSD3-201ENST00000383820 ATP2A1O14983 1001 aa21.38■■□□□ 1.01
RPUSD3-201ENST00000383820 RNF113AO15541 343 aaKnown RBP21.38■■□□□ 1.01
RPUSD3-201ENST00000383820 ZNF865P0CJ78 1059 aaPredicted RBP21.38■■□□□ 1.01
RPUSD3-201ENST00000383820 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
RPUSD3-201ENST00000383820 IGKV6D-41A0A0C4DH26 115 aa21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 MINDY4BA8MYZ0 360 aa21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 NDUFB10O96000 172 aa21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 LRRFIP1Q32MZ4 808 aaKnown RBP21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 SNRNP48Q6IEG0 339 aaKnown RBP21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 BADQ92934 168 aa21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 NUP88Q99567 741 aaPredicted RBP21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 TACC3Q9Y6A5 838 aa21.37■■□□□ 1.01
RPUSD3-201ENST00000383820 SYNGAP1Q96PV0 1343 aa21.36■■□□□ 1.01
RPUSD3-201ENST00000383820 GPAA1O43292 621 aa21.36■■□□□ 1.01
RPUSD3-201ENST00000383820 TAL1P17542 331 aaPredicted RBP21.36■■□□□ 1.01
RPUSD3-201ENST00000383820 TLE2Q04725 743 aa21.36■■□□□ 1.01
RPUSD3-201ENST00000383820 SHHQ15465 462 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms