RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
CTNS-202ENST00000381870 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
CTNS-202ENST00000381870 MACROD2A1Z1Q3 448 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 HSF2BPO75031 334 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 PAX7P23759 505 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 SMTNP53814 917 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 NNTQ13423 1086 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 SCARF1Q14162 830 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 FAXDC2Q96IV6 333 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 ZIM3Q96PE6 472 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 TBX22Q9Y458 520 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 BRD2P25440 801 aaKnown RBP16.78■□□□□ 0.28
CTNS-202ENST00000381870 SEC24CP53992 1094 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
CTNS-202ENST00000381870 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 CCDC70Q6NSX1 233 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
CTNS-202ENST00000381870 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 APPBP2Q92624 585 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 GSDMAQ96QA5 445 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 EPN3Q9H201 632 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 SLC40A1Q9NP59 571 aa16.78■□□□□ 0.28
CTNS-202ENST00000381870 KRT86O43790 486 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
CTNS-202ENST00000381870 ADORA1P30542 326 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 IL15P40933 162 aaPredicted RBP16.77■□□□□ 0.28
CTNS-202ENST00000381870 IFT88Q13099 833 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 CEP85LQ5SZL2 805 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 RRAGBQ5VZM2 374 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 MICALCLQ6ZW33 695 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 MMGT1Q8N4V1 131 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.28
CTNS-202ENST00000381870 LY9Q9HBG7 655 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 CABP5Q9NP86 173 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 LTN1O94822 1766 aa16.77■□□□□ 0.28
CTNS-202ENST00000381870 FAM205CA6NFA0 338 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 PDHBP11177 359 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 HDLBPQ00341 1268 aaKnown RBP16.77■□□□□ 0.27
CTNS-202ENST00000381870 LRCH2Q5VUJ6 765 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 ALS2CLQ60I27 953 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 IQCEQ6IPM2 695 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 ZNF790Q6PG37 636 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.27
CTNS-202ENST00000381870 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.27
CTNS-202ENST00000381870 SYMPKQ92797 1274 aaKnown RBP16.77■□□□□ 0.27
CTNS-202ENST00000381870 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.27
CTNS-202ENST00000381870 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
CTNS-202ENST00000381870 CEP57Q86XR8 500 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 EHBP1Q8NDI1 1231 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 SMCR8Q8TEV9 937 aaPredicted RBP16.76■□□□□ 0.27
CTNS-202ENST00000381870 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
CTNS-202ENST00000381870 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 A6NNZ2 444 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 NEBLO76041 1014 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 ZAP70P43403 619 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 EPHB4P54760 987 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 TUBB8Q3ZCM7 444 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 PAGR1Q9BTK6 254 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
CTNS-202ENST00000381870 EHD2Q9NZN4 543 aa16.76■□□□□ 0.27
CTNS-202ENST00000381870 ZFYP08048 801 aaPredicted RBP16.75■□□□□ 0.27
CTNS-202ENST00000381870 KRT83P78385 493 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 PTGISQ16647 500 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 KDM7AQ6ZMT4 941 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 CCT8L2Q96SF2 557 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 SLC24A3Q9HC58 644 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 AATFQ9NY61 560 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTNS-202ENST00000381870 BCL9LQ86UU0 1499 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
CTNS-202ENST00000381870 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 FRMD3A2A2Y4 597 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 EYA2O00167 538 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
CTNS-202ENST00000381870 SSBP05455 408 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTNS-202ENST00000381870 NLRP14Q86W24 1093 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 FAM228AQ86W67 206 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 SPATA4Q8NEY3 305 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 NELFBQ8WX92 580 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 PSMB7Q99436 277 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
CTNS-202ENST00000381870 C5P01031 1676 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 PPARDQ03181 441 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 SPAG1Q07617 926 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 PAK1Q13153 545 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 EMBQ6PCB8 327 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 MYCBPAPQ8TBZ2 947 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 SNX12Q9UMY4 172 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms