RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ERCC3P19447 782 aa22.58■■□□□ 1.21
TMEM88B-201ENST00000378821 CCND3P30281 292 aaPredicted RBP22.58■■□□□ 1.21
TMEM88B-201ENST00000378821 SEC62Q99442 399 aaKnown RBP22.58■■□□□ 1.21
TMEM88B-201ENST00000378821 MKNK2Q9HBH9 465 aa22.58■■□□□ 1.21
TMEM88B-201ENST00000378821 PCDH10Q9P2E7 1040 aa22.58■■□□□ 1.21
TMEM88B-201ENST00000378821 COL6A1P12109 1028 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 FXR1P51114 621 aaKnown RBP eCLIP22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 TMEM132BQ14DG7 1078 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 WDR78Q5VTH9 848 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 MFSD14CQ5VZR4 134 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 OLFML2BQ68BL8 750 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 TICAM2Q86XR7 235 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 MKL1Q969V6 931 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 SYNPO2Q9UMS6 1093 aa22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 ZNFX1Q9P2E3 1918 aaKnown RBP22.57■■□□□ 1.2
TMEM88B-201ENST00000378821 EVI5O60447 810 aa22.56■■□□□ 1.2
TMEM88B-201ENST00000378821 ADORA2AP29274 412 aa22.56■■□□□ 1.2
TMEM88B-201ENST00000378821 TDO2P48775 406 aa22.56■■□□□ 1.2
TMEM88B-201ENST00000378821 PPP1R9AQ9ULJ8 1098 aa22.56■■□□□ 1.2
TMEM88B-201ENST00000378821 PLIN4Q96Q06 1357 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 VWA5AO00534 786 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 FOXP2O15409 715 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 COBLO75128 1261 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 SLC25A27O95847 323 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 ATP2B2Q01814 1243 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 REPS2Q8NFH8 660 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 NACAP1Q9BZK3 213 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 C11orf49Q9H6J7 331 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 FBXO28Q9NVF7 368 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 MYH4Q9Y623 1939 aa22.55■■□□□ 1.2
TMEM88B-201ENST00000378821 APPP05067 770 aa22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 CHRDL2Q6WN34 429 aa22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 DPP9Q86TI2 863 aa22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 RIOX2Q8IUF8 465 aa22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 RBM27Q9P2N5 1060 aaKnown RBP22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 ZNF214Q9UL59 606 aaPredicted RBP22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 PFASO15067 1338 aa22.54■■□□□ 1.2
TMEM88B-201ENST00000378821 F5H6K3 240 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 MSCO60682 206 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 CYBAP13498 195 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 KLRC3Q07444 240 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 FAM83BQ5T0W9 1011 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 ZNF444Q8N0Y2 327 aaPredicted RBP22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 TRPV1Q8NER1 839 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 EVI5LQ96CN4 794 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 MTMR4Q9NYA4 1195 aa22.53■■□□□ 1.2
TMEM88B-201ENST00000378821 RANBP2P49792 3224 aaKnown RBP22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 CYP2C19P33261 490 aa22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 PLS1Q14651 629 aa22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 STK11IPQ8N1F8 1099 aa22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 NEDD1Q8NHV4 660 aa22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 SLC5A4Q9NY91 659 aa22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 DDX20Q9UHI6 824 aaKnown RBP22.52■■□□□ 1.2
TMEM88B-201ENST00000378821 NDUFB10O96000 172 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 FCER1AP12319 257 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 PDE4AP27815 886 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 NCAPG2Q86XI2 1143 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 CEP95Q96GE4 821 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 NAPBQ9H115 298 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 CLIP2Q9UDT6 1046 aa22.51■■□□□ 1.19
TMEM88B-201ENST00000378821 ATP2A1O14983 1001 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 PRDM1O75626 825 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 COPB2P35606 906 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 STAT3P40763 770 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 PDE4BQ07343 736 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 PPARAQ07869 468 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 PRPF38AQ8NAV1 312 aaKnown RBP22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 GMCL1P1Q8NEA9 526 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 SLF1Q9BQI6 1058 aa22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 DIS3Q9Y2L1 958 aaKnown RBP22.5■■□□□ 1.19
TMEM88B-201ENST00000378821 A0A1W2PPC1 479 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 TTLL1O95922 423 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 SLC3A2P08195 630 aaKnown RBP22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 ALX1Q15699 326 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 MAML3Q96JK9 1138 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 ANAPC4Q9UJX5 808 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 TRIOBPQ9H2D6 2365 aa22.49■■□□□ 1.19
TMEM88B-201ENST00000378821 PLXNA1Q9UIW2 1896 aa22.48■■□□□ 1.19
TMEM88B-201ENST00000378821 CCDC129Q6ZRS4 1044 aa22.48■■□□□ 1.19
TMEM88B-201ENST00000378821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.19
TMEM88B-201ENST00000378821 NRBP1Q9UHY1 535 aa22.48■■□□□ 1.19
TMEM88B-201ENST00000378821 FGRP09769 529 aa22.47■■□□□ 1.19
TMEM88B-201ENST00000378821 BMP8BP34820 402 aa22.47■■□□□ 1.19
TMEM88B-201ENST00000378821 ZNF792Q3KQV3 632 aa22.47■■□□□ 1.19
TMEM88B-201ENST00000378821 MMP19Q99542 508 aa22.47■■□□□ 1.19
TMEM88B-201ENST00000378821 GDF15Q99988 308 aa22.47■■□□□ 1.19
TMEM88B-201ENST00000378821 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 SEPT4O43236 478 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 TSPY3P0CV98 308 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 TSPY8P0CW00 308 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 NOVP48745 357 aa22.46■■□□□ 1.19
TMEM88B-201ENST00000378821 TFAP4Q01664 338 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms