RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 HOOK2Q96ED9 719 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 BICD1Q96G01 975 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 MPHOSPH6Q99547 160 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 GTPBP4Q9BZE4 634 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 DHX36Q9H2U1 1008 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZSWIM4Q9H7M6 989 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 GOLGA6L9A6NEM1 432 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 TECP42680 631 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 CEP135Q66GS9 1140 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 LY9Q9HBG7 655 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 EXOSC10Q01780 885 aaKnown RBP15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 FBXO11Q86XK2 927 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 SP8Q8IXZ3 490 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 PNPLA7Q6ZV29 1317 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 MYCLP12524 364 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 HERC4Q5GLZ8 1057 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 TBC1D16Q8TBP0 767 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 PCDHA5Q9Y5H7 936 aa15.93■□□□□ 0.14
SHROOM1-203ENST00000378679 RIOK3O14730 519 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 PIGSQ96S52 555 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 DNAI1Q9UI46 699 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 A0A087WWV3 80 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 CDC27P30260 824 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 CHRNA5P30532 468 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 CSGALNACT2Q8N6G5 542 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 PCDHA12Q9UN75 941 aa15.92■□□□□ 0.14
SHROOM1-203ENST00000378679 ZBED4O75132 1171 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 CRKP46108 304 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 GRM1Q13255 1194 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 TDRD3Q9H7E2 651 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 MROH7-TTC4A0A0A0MT08 1334 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 TBC1D8BQ0IIM8 1120 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 PAK1Q13153 545 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 CNNM4Q6P4Q7 775 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 TMED8Q6PL24 325 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 COA7Q96BR5 231 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 CSRNP2Q9H175 543 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 CPVLQ9H3G5 476 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 LUC7L2Q9Y383 392 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 SYNRGQ9UMZ2 1314 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 FAM196BA6NMK8 535 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 DDX39AO00148 427 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 ARID5AQ03989 594 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 KIF13AQ9H1H9 1805 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 PPP6R2O75170 966 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 AOC3Q16853 763 aa15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 SYMPKQ92797 1274 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-203ENST00000378679 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 B4DLN1 442 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 ALAS1P13196 640 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 KRT13P13646 458 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 CYLC1P35663 651 aaPredicted RBP15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 PRR16Q569H4 304 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 TMTC3Q6ZXV5 915 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 FBXO33Q7Z6M2 555 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 TMEM47Q9BQJ4 181 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 TCHPQ9BT92 498 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 PCDHA4Q9UN74 947 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 PCDHB6Q9Y5E3 794 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 SHPRHQ149N8 1683 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 ERCC3P19447 782 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 CDC25AP30304 524 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 SSR1P43307 286 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 AMNQ9BXJ7 453 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 DNM3Q9UQ16 869 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 ERLIN1O75477 346 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 NOP2P46087 812 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 SGMS1Q86VZ5 419 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 FOXP4Q8IVH2 680 aaPredicted RBP15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 IGSF22Q8N9C0 903 aa15.9■□□□□ 0.14
SHROOM1-203ENST00000378679 TRAPPC10P48553 1259 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 DCAF15Q66K64 600 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 ECE2O60344 883 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 PPP1R2P41236 205 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 IQCEQ6IPM2 695 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 TBC1D7Q9P0N9 293 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 KLRK1P26718 216 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 CIAPIN1Q6FI81 312 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 MTA3Q9BTC8 594 aa15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 XPO4Q9C0E2 1151 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-203ENST00000378679 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms