RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ABCB6Q9NP58 842 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PALLDQ8WX93 1383 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 BUB1BO60566 1050 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ZSCAN29Q8IWY8 852 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 KCNB2Q92953 911 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 FUCA2Q9BTY2 467 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 NYXQ9GZU5 481 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 RAB17Q9H0T7 212 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 THAP9Q9H5L6 903 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 PARP2Q9UGN5 583 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ABCC12Q96J65 1359 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 CLNS1AP54105 237 aaKnown RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 CTSWP56202 376 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 CALCOCO2Q13137 446 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 RBM43Q6ZSC3 357 aaKnown RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 RUBCNQ92622 972 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 DHTKD1Q96HY7 919 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ANKRD26Q9UPS8 1709 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 MYO1CO00159 1063 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 TADA3O75528 432 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 TOGARAM2Q6ZUX3 1019 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-202ENST00000377865 GLT8D2Q9H1C3 349 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 GBP1P32455 592 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 ADAM21Q9UKJ8 722 aa9.74□□□□□ -0.85
PCDH9-202ENST00000377865 A0A087WWV3 80 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ATP1A3P13637 1013 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 IFNAR1P17181 557 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ADD2P35612 726 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 RAD51AP2Q09MP3 1159 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 NAA25Q14CX7 972 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 CCDC6Q16204 474 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 TMEM132AQ24JP5 1023 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 LRRC24Q50LG9 513 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.73□□□□□ -0.858e-7■■■■■ 145.9
PCDH9-202ENST00000377865 AATFQ9NY61 560 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 FLOT1O75955 427 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 CCT5P48643 541 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 CACNA2D3Q8IZS8 1091 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 UBL4BQ8N7F7 174 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ZBTB38Q8NAP3 1195 aaPredicted RBP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 PSD3Q9NYI0 1048 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ARPP21Q9UBL0 812 aaPredicted RBP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 RBM5P52756 815 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 BLIDQ8IZY5 108 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ZBTB9Q96C00 473 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 CETN3O15182 167 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 LIFRP42702 1097 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 KLHL30Q0D2K2 578 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 USPL1Q5W0Q7 1092 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 RRAGAQ7L523 313 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 NIP7Q9Y221 180 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 PTPRUQ92729 1446 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 VIMP08670 466 aaKnown RBP9.73□□□□□ -0.85
PCDH9-202ENST00000377865 LIG3P49916 1009 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 NKIRAS1Q9NYS0 192 aa9.73□□□□□ -0.85
PCDH9-202ENST00000377865 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 FAM13AO94988 1023 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 INTS8Q75QN2 995 aaKnown RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 HDAC9Q9UKV0 1011 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 CEP104O60308 925 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 SCG2P13521 617 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 TNNI2P48788 182 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 PPP1R7Q15435 360 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 NDUFA10O95299 355 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 RCAN1P53805 252 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 SNCBQ16143 134 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 CEP85LQ5SZL2 805 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 E4F1Q66K89 784 aaPredicted RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 HS2ST1Q7LGA3 356 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 KLHL7Q8IXQ5 586 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 TNKSO95271 1327 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 CTNNA1P35221 906 aaKnown RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 NAA30Q147X3 362 aaPredicted RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 LMNTD2Q8IXW0 634 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 PAGE5Q96GU1 130 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 ACTR5Q9H9F9 607 aaPredicted RBP9.72□□□□□ -0.85
PCDH9-202ENST00000377865 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
PCDH9-202ENST00000377865 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.85
PCDH9-202ENST00000377865 OSBP2Q969R2 916 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms