RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TDO2P48775 406 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 LRIT3Q3SXY7 679 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 RIOX2Q8IUF8 465 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 MMP19Q99542 508 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-204ENST00000376643 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 PPP1R9AQ9ULJ8 1098 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 ADAMTS5Q9UNA0 930 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
HDAC6-204ENST00000376643 IGHA2P01877 340 aa17.62■□□□□ 0.41
HDAC6-204ENST00000376643 SYN1P17600 705 aa17.62■□□□□ 0.41
HDAC6-204ENST00000376643 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-204ENST00000376643 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-204ENST00000376643 CTDP1Q9Y5B0 961 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-204ENST00000376643 ALPK3Q96L96 1907 aa17.62■□□□□ 0.41
HDAC6-204ENST00000376643 BAZ2AQ9UIF9 1905 aaKnown RBP17.61■□□□□ 0.41
HDAC6-204ENST00000376643 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 MINDY4BA8MYZ0 360 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 VWA5AO00534 786 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 GPAA1O43292 621 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 APPP05067 770 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 STAT3P40763 770 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 LRRC26Q2I0M4 334 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 SLFNL1Q499Z3 407 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 KIAA1755Q5JYT7 1200 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
HDAC6-204ENST00000376643 MAML3Q96JK9 1138 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
HDAC6-204ENST00000376643 RASA1P20936 1047 aa17.6■□□□□ 0.41
HDAC6-204ENST00000376643 PDE4BQ07343 736 aa17.6■□□□□ 0.41
HDAC6-204ENST00000376643 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
HDAC6-204ENST00000376643 RANBP2P49792 3224 aaKnown RBP17.59■□□□□ 0.41
HDAC6-204ENST00000376643 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
HDAC6-204ENST00000376643 COBLO75128 1261 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 FDX1P10109 184 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 RARBP10826 455 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 FAM83BQ5T0W9 1011 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 PRPF38AQ8NAV1 312 aaKnown RBP17.59■□□□□ 0.41
HDAC6-204ENST00000376643 OSBP2Q969R2 916 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
HDAC6-204ENST00000376643 ZBED4O75132 1171 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 RNF180Q86T96 592 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 TRPV1Q8NER1 839 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 FSD1Q9BTV5 496 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 FBXO40Q9UH90 709 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-204ENST00000376643 RLFQ13129 1914 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 FRMPD3Q5JV73 1810 aa17.58■□□□□ 0.4
HDAC6-204ENST00000376643 F5H6K3 240 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 ATP2A1O14983 1001 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 TTLL1O95922 423 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 KLRC3Q07444 240 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 TINF2Q9BSI4 451 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 NAPBQ9H115 298 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 FEM1BQ9UK73 627 aa17.57■□□□□ 0.4
HDAC6-204ENST00000376643 NDUFB10O96000 172 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 CHGBP05060 677 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 AKR1A1P14550 325 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 ATN1P54259 1190 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-204ENST00000376643 OAZ1P54368 228 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 RTP1P59025 263 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 GJC2Q5T442 439 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-204ENST00000376643 C1orf53Q5VUE5 145 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 MKL1Q969V6 931 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDAC6-204ENST00000376643 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
HDAC6-204ENST00000376643 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 SOX1O00570 391 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-204ENST00000376643 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-204ENST00000376643 MX1P20591 662 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 MDM2Q00987 491 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-204ENST00000376643 ZNF792Q3KQV3 632 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 SNRNP48Q6IEG0 339 aaKnown RBP17.55■□□□□ 0.4
HDAC6-204ENST00000376643 SLC39A5Q6ZMH5 540 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 MTMR4Q9NYA4 1195 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 ATP11BQ9Y2G3 1177 aa17.55■□□□□ 0.4
HDAC6-204ENST00000376643 SYNGAP1Q96PV0 1343 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 SNX17Q15036 470 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 LRRC41Q15345 812 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 TSHZ3Q63HK5 1081 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 ZNF467Q7Z7K2 595 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-204ENST00000376643 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 EPB41L4AQ9HCS5 686 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-204ENST00000376643 GREB1LQ9C091 1923 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms