RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RLFQ13129 1914 aa27.83■■■□□ 2.05
C9orf47-202ENST00000375850 ATN1P54259 1190 aaPredicted RBP27.83■■■□□ 2.05
C9orf47-202ENST00000375850 RTP1P59025 263 aa27.83■■■□□ 2.05
C9orf47-202ENST00000375850 TMEM132BQ14DG7 1078 aa27.83■■■□□ 2.05
C9orf47-202ENST00000375850 SBK1Q52WX2 424 aa27.83■■■□□ 2.05
C9orf47-202ENST00000375850 PUS7LQ9H0K6 701 aaKnown RBP27.83■■■□□ 2.05
C9orf47-202ENST00000375850 KCTD2Q14681 263 aa27.82■■■□□ 2.04
C9orf47-202ENST00000375850 GJC2Q5T442 439 aaPredicted RBP27.82■■■□□ 2.04
C9orf47-202ENST00000375850 PPP1R9AQ9ULJ8 1098 aa27.82■■■□□ 2.04
C9orf47-202ENST00000375850 STXBP5LQ9Y2K9 1186 aa27.82■■■□□ 2.04
C9orf47-202ENST00000375850 VWA5AO00534 786 aa27.81■■■□□ 2.04
C9orf47-202ENST00000375850 STAT3P40763 770 aa27.81■■■□□ 2.04
C9orf47-202ENST00000375850 STRBPQ96SI9 672 aaKnown RBP27.81■■■□□ 2.04
C9orf47-202ENST00000375850 MMP19Q99542 508 aa27.81■■■□□ 2.04
C9orf47-202ENST00000375850 C1orf53Q5VUE5 145 aa27.8■■■□□ 2.04
C9orf47-202ENST00000375850 SLC39A5Q6ZMH5 540 aa27.8■■■□□ 2.04
C9orf47-202ENST00000375850 KBTBD3Q8NAB2 608 aa27.8■■■□□ 2.04
C9orf47-202ENST00000375850 ZNF287Q9HBT7 754 aa27.8■■■□□ 2.04
C9orf47-202ENST00000375850 MYH8P13535 1937 aa27.8■■■□□ 2.04
C9orf47-202ENST00000375850 ZFYP08048 801 aaPredicted RBP27.79■■■□□ 2.04
C9orf47-202ENST00000375850 SNX17Q15036 470 aa27.79■■■□□ 2.04
C9orf47-202ENST00000375850 LRRFIP1Q32MZ4 808 aaKnown RBP27.79■■■□□ 2.04
C9orf47-202ENST00000375850 FAM109BQ6ICB4 259 aaPredicted RBP27.79■■■□□ 2.04
C9orf47-202ENST00000375850 SAMD1Q6SPF0 538 aaPredicted RBP27.79■■■□□ 2.04
C9orf47-202ENST00000375850 MTMR10Q9NXD2 777 aa27.79■■■□□ 2.04
C9orf47-202ENST00000375850 NYAP2Q9P242 653 aa27.79■■■□□ 2.04
C9orf47-202ENST00000375850 ATP11BQ9Y2G3 1177 aa27.79■■■□□ 2.04
C9orf47-202ENST00000375850 ROBO3Q96MS0 1386 aa27.78■■■□□ 2.04
C9orf47-202ENST00000375850 GNAT2P19087 354 aa27.78■■■□□ 2.04
C9orf47-202ENST00000375850 APPBP2Q92624 585 aa27.78■■■□□ 2.04
C9orf47-202ENST00000375850 TINF2Q9BSI4 451 aa27.78■■■□□ 2.04
C9orf47-202ENST00000375850 MKNK2Q9HBH9 465 aa27.78■■■□□ 2.04
C9orf47-202ENST00000375850 ZNF214Q9UL59 606 aaPredicted RBP27.78■■■□□ 2.04
C9orf47-202ENST00000375850 SMIM22K7EJ46 135 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 CHGBP05060 677 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 RARBP10826 455 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 LRRC41Q15345 812 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 FAM83BQ5T0W9 1011 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
C9orf47-202ENST00000375850 FBXO28Q9NVF7 368 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 SYNPO2Q9UMS6 1093 aa27.77■■■□□ 2.04
C9orf47-202ENST00000375850 BAZ2AQ9UIF9 1905 aaKnown RBP27.77■■■□□ 2.04
C9orf47-202ENST00000375850 SMARCA5O60264 1052 aaPredicted RBP27.76■■■□□ 2.03
C9orf47-202ENST00000375850 ZNF792Q3KQV3 632 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 PRAMEF19Q5SWL8 479 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 ANO1Q5XXA6 986 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 SLF1Q9BQI6 1058 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.76■■■□□ 2.03
C9orf47-202ENST00000375850 TEX13BQ9BXU2 312 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 DCTPP1Q9H773 170 aa27.76■■■□□ 2.03
C9orf47-202ENST00000375850 GSG1L2A8MUP6 293 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 RAD21O60216 631 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 RASA1P20936 1047 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 Q7L0L9 218 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 RNF180Q86T96 592 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 REPS2Q8NFH8 660 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 XPNPEP3Q9NQH7 507 aa27.75■■■□□ 2.03
C9orf47-202ENST00000375850 RNF113AO15541 343 aaKnown RBP27.74■■■□□ 2.03
C9orf47-202ENST00000375850 MYCNP04198 464 aaPredicted RBP27.74■■■□□ 2.03
C9orf47-202ENST00000375850 ADCYAP1R1P41586 468 aa27.74■■■□□ 2.03
C9orf47-202ENST00000375850 FAM47AQ5JRC9 791 aa27.74■■■□□ 2.03
C9orf47-202ENST00000375850 PRPF38AQ8NAV1 312 aaKnown RBP27.74■■■□□ 2.03
C9orf47-202ENST00000375850 PHF24Q9UPV7 400 aa27.74■■■□□ 2.03
C9orf47-202ENST00000375850 CNPY2Q9Y2B0 182 aa27.74■■■□□ 2.03
C9orf47-202ENST00000375850 MYH7P12883 1935 aa27.74■■■□□ 2.03
C9orf47-202ENST00000375850 POTEB2H3BUK9 544 aa27.73■■■□□ 2.03
C9orf47-202ENST00000375850 ATP2A1O14983 1001 aa27.73■■■□□ 2.03
C9orf47-202ENST00000375850 AKR1A1P14550 325 aa27.73■■■□□ 2.03
C9orf47-202ENST00000375850 C20orf194Q5TEA3 1177 aa27.73■■■□□ 2.03
C9orf47-202ENST00000375850 PARP14Q460N5 1801 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 MINDY4BA8MYZ0 360 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 F5H6K3 240 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 DLL1O00548 723 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 PGK2P07205 417 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 KLRC3Q07444 240 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 TRIM60Q495X7 471 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 OSBP2Q969R2 916 aa27.72■■■□□ 2.03
C9orf47-202ENST00000375850 GPAA1O43292 621 aa27.71■■■□□ 2.03
C9orf47-202ENST00000375850 ZNF444Q8N0Y2 327 aaPredicted RBP27.71■■■□□ 2.03
C9orf47-202ENST00000375850 PRDM5Q9NQX1 630 aaPredicted RBP27.71■■■□□ 2.03
C9orf47-202ENST00000375850 SYNGAP1Q96PV0 1343 aa27.7■■■□□ 2.03
C9orf47-202ENST00000375850 NDUFB10O96000 172 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 TDO2P48775 406 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.7■■■□□ 2.02
C9orf47-202ENST00000375850 MKL1Q969V6 931 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 NACAP1Q9BZK3 213 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 PDLIM7Q9NR12 457 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 CTDP1Q9Y5B0 961 aaPredicted RBP27.7■■■□□ 2.02
C9orf47-202ENST00000375850 TACC3Q9Y6A5 838 aa27.7■■■□□ 2.02
C9orf47-202ENST00000375850 COL6A3P12111 3177 aa27.69■■■□□ 2.02
C9orf47-202ENST00000375850 ZBED4O75132 1171 aa27.69■■■□□ 2.02
C9orf47-202ENST00000375850 ZNF865P0CJ78 1059 aaPredicted RBP27.69■■■□□ 2.02
C9orf47-202ENST00000375850 SNRNP48Q6IEG0 339 aaKnown RBP27.69■■■□□ 2.02
C9orf47-202ENST00000375850 ZNF467Q7Z7K2 595 aaPredicted RBP27.69■■■□□ 2.02
C9orf47-202ENST00000375850 DDX11Q96FC9 970 aa27.69■■■□□ 2.02
C9orf47-202ENST00000375850 TSEN34Q9BSV6 310 aaKnown RBP27.69■■■□□ 2.02
C9orf47-202ENST00000375850 DNAH12Q6ZR08 3092 aa27.69■■■□□ 2.02
C9orf47-202ENST00000375850 GREB1LQ9C091 1923 aaPredicted RBP27.69■■■□□ 2.02
C9orf47-202ENST00000375850 TTC41PQ6P2S7 1318 aa27.68■■■□□ 2.02
C9orf47-202ENST00000375850 IGKV6D-41A0A0C4DH26 115 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms