RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 BMP15O95972 392 aa20.65■□□□□ 0.9
LMNA-207ENST00000368301 GTF2F1P35269 517 aaKnown RBP eCLIP20.65■□□□□ 0.9
LMNA-207ENST00000368301 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
LMNA-207ENST00000368301 NFE2L3Q9Y4A8 694 aa20.65■□□□□ 0.9
LMNA-207ENST00000368301 F8W031 263 aaPredicted RBP20.64■□□□□ 0.9
LMNA-207ENST00000368301 HSP90AA2PQ14568 343 aaPredicted RBP20.64■□□□□ 0.9
LMNA-207ENST00000368301 KANK3Q6NY19 840 aa20.64■□□□□ 0.9
LMNA-207ENST00000368301 HEATR3Q7Z4Q2 680 aa20.64■□□□□ 0.9
LMNA-207ENST00000368301 MLKLQ8NB16 471 aa20.64■□□□□ 0.9
LMNA-207ENST00000368301 PCDHA4Q9UN74 947 aa20.64■□□□□ 0.9
LMNA-207ENST00000368301 GAKO14976 1311 aa20.64■□□□□ 0.89
LMNA-207ENST00000368301 PALM3A6NDB9 673 aaPredicted RBP20.64■□□□□ 0.89
LMNA-207ENST00000368301 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.89
LMNA-207ENST00000368301 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.89
LMNA-207ENST00000368301 CD44P16070 742 aaKnown RBP20.63■□□□□ 0.89
LMNA-207ENST00000368301 CDC25AP30304 524 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 SMYD4Q8IYR2 804 aaPredicted RBP20.63■□□□□ 0.89
LMNA-207ENST00000368301 CCAR2Q8N163 923 aaKnown RBP20.63■□□□□ 0.89
LMNA-207ENST00000368301 C4orf32Q8N8J7 132 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 MYH1P12882 1939 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 M0R2N6 131 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 SFPQP23246 707 aaKnown RBP eCLIP20.63■□□□□ 0.89
LMNA-207ENST00000368301 TRAPPC10P48553 1259 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 CCDC150Q8NCX0 1101 aa20.63■□□□□ 0.89
LMNA-207ENST00000368301 FAM163AQ96GL9 167 aaPredicted RBP20.63■□□□□ 0.89
LMNA-207ENST00000368301 SAMSN1Q9NSI8 373 aaKnown RBP20.63■□□□□ 0.89
LMNA-207ENST00000368301 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 STXBP3O00186 592 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 ZNF18P17022 549 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 CALML3P27482 149 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 DPYDQ12882 1025 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 USP17L2Q6R6M4 530 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 CERS5Q8N5B7 392 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 CEP95Q96GE4 821 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 PICALMQ13492 652 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 E2F4Q16254 413 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 E4F1Q66K89 784 aaPredicted RBP20.62■□□□□ 0.89
LMNA-207ENST00000368301 VSTM4Q8IW00 320 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 SP8Q8IXZ3 490 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 ZNF710Q8N1W2 664 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 BLZF1Q9H2G9 400 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 SH3GLB2Q9NR46 395 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
LMNA-207ENST00000368301 KLRF2D3W0D1 207 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 RRP9O43818 475 aaKnown RBP20.61■□□□□ 0.89
LMNA-207ENST00000368301 GNAQP50148 359 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 CCDC178Q5BJE1 867 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 KLHL10Q6JEL2 608 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 NYAP1Q6ZVC0 841 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 NEDD1Q8NHV4 660 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 ENOX1Q8TC92 643 aaKnown RBP20.61■□□□□ 0.89
LMNA-207ENST00000368301 ZNF592Q92610 1267 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 MTRQ99707 1265 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 CBFA2T2O43439 604 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 DOK7Q18PE1 504 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 TBC1D22AQ8WUA7 517 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 BARHL2Q9NY43 387 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
LMNA-207ENST00000368301 PLCG2P16885 1265 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 STX17P56962 302 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 INF2Q27J81 1249 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 COL23A1Q86Y22 540 aaPredicted RBP20.6■□□□□ 0.89
LMNA-207ENST00000368301 NT5C2P49902 561 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 CEP135Q66GS9 1140 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 HOMER1Q86YM7 354 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 TMEM60Q9H2L4 133 aa20.6■□□□□ 0.89
LMNA-207ENST00000368301 COBLO75128 1261 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 PDXDC2PQ6P474 469 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 CERS3Q8IU89 383 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 CLEC10AQ8IUN9 316 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 DDX4Q9NQI0 724 aaKnown RBP20.59■□□□□ 0.89
LMNA-207ENST00000368301 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 CCDC194A0A1B0GVG4 234 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 SRGNP10124 158 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 ZNF287Q9HBT7 754 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 VAT1LQ9HCJ6 419 aa20.59■□□□□ 0.89
LMNA-207ENST00000368301 CDK11BP21127 795 aaKnown RBP20.58■□□□□ 0.89
LMNA-207ENST00000368301 CUL4BQ13620 913 aa20.58■□□□□ 0.89
LMNA-207ENST00000368301 PTPN14Q15678 1187 aa20.58■□□□□ 0.89
LMNA-207ENST00000368301 USP17L5A8MUK1 530 aa20.58■□□□□ 0.88
LMNA-207ENST00000368301 SLURP2P0DP57 97 aa20.58■□□□□ 0.88
LMNA-207ENST00000368301 TOP1P11387 765 aaKnown RBP20.58■□□□□ 0.88
LMNA-207ENST00000368301 SCNN1DP51172 638 aa20.58■□□□□ 0.88
LMNA-207ENST00000368301 SLF2Q8IX21 1173 aa20.58■□□□□ 0.88
LMNA-207ENST00000368301 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
LMNA-207ENST00000368301 PPP1R3GB7ZBB8 358 aa20.57■□□□□ 0.88
LMNA-207ENST00000368301 MYO1BO43795 1136 aa20.57■□□□□ 0.88
LMNA-207ENST00000368301 PARP1P09874 1014 aaKnown RBP20.57■□□□□ 0.88
LMNA-207ENST00000368301 KARSQ15046 597 aaKnown RBP20.57■□□□□ 0.88
LMNA-207ENST00000368301 COA1Q9GZY4 146 aa20.57■□□□□ 0.88
LMNA-207ENST00000368301 UBA5Q9GZZ9 404 aa20.57■□□□□ 0.88
LMNA-207ENST00000368301 EIF6P56537 245 aaKnown RBP20.56■□□□□ 0.88
LMNA-207ENST00000368301 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
LMNA-207ENST00000368301 DAGLBQ8NCG7 672 aa20.56■□□□□ 0.88
LMNA-207ENST00000368301 PPP1R13BQ96KQ4 1090 aa20.56■□□□□ 0.88
LMNA-207ENST00000368301 SPZ1Q9BXG8 430 aa20.56■□□□□ 0.88
LMNA-207ENST00000368301 KCND1Q9NSA2 647 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms