RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 A0A1W2PQ64 194 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 A0A1W2PQD8 194 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 USP17L5A8MUK1 530 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 CUTAO60888 179 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 MATR3P43243 847 aaKnown RBP eCLIP6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 SEC23AQ15436 765 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 TRAPPC3LQ5T215 181 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 PAGE5Q96GU1 130 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 PIGSQ96S52 555 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 RNF41Q9H4P4 317 aaPredicted RBP6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 PKD2L1Q9P0L9 805 aa6.39□□□□□ -1.39
TNFSF4-202ENST00000367718 POTEMA6NI47 508 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CYTH3O43739 400 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SRGAP2O75044 1071 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 FCER1AP12319 257 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 STAT6P42226 847 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 FXR1P51114 621 aaKnown RBP eCLIP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 DHX37Q8IY37 1157 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 MTRQ99707 1265 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 BAG1Q99933 345 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SH2D3AQ9BRG2 576 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 BCAS3Q9H6U6 928 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 BSDC1Q9NW68 430 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 GUCA1BQ9UMX6 200 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 ADAMTSL3P82987 1691 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 ALS2Q96Q42 1657 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 KLRF2D3W0D1 207 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 PTPREP23469 700 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 LIFRP42702 1097 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 FAM193AP78312 1265 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 USH1GQ495M9 461 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 DPP8Q6V1X1 898 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SGMS1Q86VZ5 419 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 ZFPM1Q8IX07 1006 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 PROCA1Q8NCQ7 364 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CRACR2AQ9BSW2 395 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SMARCAL1Q9NZC9 954 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 HDAC6Q9UBN7 1215 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SYNRGQ9UMZ2 1314 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 ACTN4O43707 911 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SORBS3O60504 671 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 GDF11O95390 407 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SCG2P13521 617 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 XBP1P17861 261 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 RILPL1Q5EBL4 403 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 ZNF569Q5MCW4 686 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 TMTC3Q6ZXV5 915 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 PPFIBP1Q86W92 1011 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 SMCR8Q8TEV9 937 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 LRRC15Q8TF66 581 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CHP1Q99653 195 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 NOL10Q9BSC4 688 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 CCDC94Q9BW85 323 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 TRIM34Q9BYJ4 488 aa6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 PHRF1Q9P1Y6 1649 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-202ENST00000367718 COL18A1P39060 1754 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 BAZ2AQ9UIF9 1905 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 CCDC196A0A1B0GTZ2 297 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 UBA7P41226 1012 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 MNX1P50219 401 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 EVCP57679 992 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 UBXN1Q04323 297 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 RCSD1Q6JBY9 416 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 RAD9BQ6WBX8 426 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 NELFCDQ8IXH7 590 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 IKZF4Q9H2S9 585 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 BRMS1Q9HCU9 246 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 PPP2R2CQ9Y2T4 447 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 PAXBP1Q9Y5B6 917 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 XDHP47989 1333 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 SPATA31A5Q5VU36 1347 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 SPATA31A7Q8IWB4 1347 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 NPHP3-ACAD11A0A0J9YXS1 232 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 MEIS1O00470 390 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 NFIAQ12857 509 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 MCM6Q14566 821 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 NELFBQ8WX92 580 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 TRIM47Q96LD4 638 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 EYA3Q99504 573 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 TANGO6Q9C0B7 1094 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 PDGFDQ9GZP0 370 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 POLLQ9UGP5 575 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 DUSP10Q9Y6W6 482 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 NWD2Q9ULI1 1742 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 MACROD2A1Z1Q3 448 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 B4DLN1 442 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 USP17L15C9J2P7 530 aa6.37□□□□□ -1.39
TNFSF4-202ENST00000367718 USP17L13C9JLJ4 530 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms