RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 FSD2A1L4K1 749 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 COBLO75128 1261 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SNHG28P0DPA3 235 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TOP1P11387 765 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 PDCP20941 246 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 NDUFA8P51970 172 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 STK38Q15208 465 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 PFKFB3Q16875 520 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 CCDC96Q2M329 555 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 RNF26Q9BY78 433 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 C4AP0C0L4 1744 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 ZNF831Q5JPB2 1677 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 STXBP3O00186 592 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 NLRP5P59047 1200 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SPP2Q13103 211 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SNW1Q13573 536 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 SLF2Q8IX21 1173 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TMTC2Q8N394 836 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 CYP2W1Q8TAV3 490 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 NUDT12Q9BQG2 462 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 MTA3Q9BTC8 594 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SPTLC2O15270 562 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TDP2O95551 362 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 FAM83BQ5T0W9 1011 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 CPLX2Q6PUV4 134 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 METTL16Q86W50 562 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 CCAR1Q8IX12 1150 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 TRIM22Q8IYM9 498 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 ADGRF4Q8IZF3 695 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 FSIP1Q8NA03 581 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TMEM87AQ8NBN3 555 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 IL27Q8NEV9 243 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 FUCA2Q9BTY2 467 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 GPRC5DQ9NZD1 345 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TELO2Q9Y4R8 837 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 UBR3Q6ZT12 1888 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TRAF5O00463 557 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 DDAH1O94760 285 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 HLA-DOAP06340 250 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 CAP2P40123 477 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 NASPP49321 788 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 SLC39A14Q15043 492 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 GPR162Q16538 588 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 MED15Q96RN5 788 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 HDAC9Q9UKV0 1011 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 ZBTB21Q9ULJ3 1066 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 PCDHA6Q9UN73 950 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 PCDHA8Q9Y5H6 950 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TRIM75PA6NK02 468 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 M0R2N6 131 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SLC3A2P08195 630 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 PARP1P09874 1014 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 PFKFB1P16118 471 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 HOXA13P31271 388 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 LONRF3Q496Y0 759 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 EHD4Q9H223 541 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 TCP11L1Q9NUJ3 509 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 RTEL1Q9NZ71 1219 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 RIPK3Q9Y572 518 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 CACNA1SQ13698 1873 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 COL24A1Q17RW2 1714 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 SLC1A4P43007 532 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 FKBP1AP62942 108 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 USH1GQ495M9 461 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 DPF2Q92785 391 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 AGBL1Q96MI9 1066 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 MTRQ99707 1265 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 DHX36Q9H2U1 1008 aaKnown RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 RIOX1Q9H6W3 641 aa3.3□□□□□ -1.88
LTN1-201ENST00000361371 FBXO2Q9UK22 296 aaPredicted RBP3.3□□□□□ -1.88
LTN1-201ENST00000361371 SMCO2A6NFE2 343 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 GOLGA6L22H0YM25 854 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 NKRFO15226 690 aaKnown RBP eCLIP3.29□□□□□ -1.88
LTN1-201ENST00000361371 PRR29P0C7W0 189 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 HMGB2P26583 209 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 CCDC174Q6PII3 467 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 FMR1NBQ8N0W7 255 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 C4orf32Q8N8J7 132 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 KANSL2Q9H9L4 492 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 N4BP2Q86UW6 1770 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 PTGS1P23219 599 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 MCM7P33993 719 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 MKRN3Q13064 507 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 C11orf57Q6ZUT1 292 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 AMOTL1Q8IY63 956 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 CPXCR1Q8N123 301 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 NMRK2Q9NPI5 230 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 TMOD2Q9NZR1 351 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 TNS1Q9HBL0 1735 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 BCORQ6W2J9 1755 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 TTLL1O95922 423 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 LMNB1P20700 586 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 BMP6P22004 513 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 TNNI2P48788 182 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 UBE2HP62256 183 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 HSP90AA4PQ58FG1 418 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 LUZP1Q86V48 1076 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms