RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
THSD1-202ENST00000349258 FMR1Q06787 632 aaKnown RBP eCLIP19.04■□□□□ 0.64
THSD1-202ENST00000349258 GPCPD1Q9NPB8 672 aa19.04■□□□□ 0.64
THSD1-202ENST00000349258 NAPAP54920 295 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 ZSCAN29Q8IWY8 852 aaPredicted RBP19.03■□□□□ 0.64
THSD1-202ENST00000349258 SRGNP10124 158 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 NLGN1Q8N2Q7 840 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 DDX4Q9NQI0 724 aaKnown RBP19.03■□□□□ 0.64
THSD1-202ENST00000349258 NFE2L3Q9Y4A8 694 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 MYH6P13533 1939 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 USP17L5A8MUK1 530 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 TPM2P07951 284 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 CHRNA5P30532 468 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 CRAMP1Q96RY5 1269 aa19.03■□□□□ 0.64
THSD1-202ENST00000349258 TAF1LQ8IZX4 1826 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 ACTN4O43707 911 aaKnown RBP19.02■□□□□ 0.64
THSD1-202ENST00000349258 DHX8Q14562 1220 aaKnown RBP19.02■□□□□ 0.64
THSD1-202ENST00000349258 ATP6V0A2Q9Y487 856 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 A0A1B0GUL6 1792 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 ECM29Q5VYK3 1845 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 PARP1P09874 1014 aaKnown RBP19.02■□□□□ 0.64
THSD1-202ENST00000349258 TNNT1P13805 278 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 ZNF287Q9HBT7 754 aa19.02■□□□□ 0.64
THSD1-202ENST00000349258 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
THSD1-202ENST00000349258 MDM2Q00987 491 aaPredicted RBP19.01■□□□□ 0.63
THSD1-202ENST00000349258 SP8Q8IXZ3 490 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 PIGSQ96S52 555 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 SAMSN1Q9NSI8 373 aaKnown RBP19.01■□□□□ 0.63
THSD1-202ENST00000349258 SPTLC3Q9NUV7 552 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 NFIAQ12857 509 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 KARSQ15046 597 aaKnown RBP19.01■□□□□ 0.63
THSD1-202ENST00000349258 LETM2Q2VYF4 491 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 JAKMIP3Q5VZ66 844 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 TBC1D22AQ8WUA7 517 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 AKR1B1P15121 316 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 PLCG2P16885 1265 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 SFPQP23246 707 aaKnown RBP eCLIP19.01■□□□□ 0.63
THSD1-202ENST00000349258 GRM4Q14833 912 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 SLF2Q8IX21 1173 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 TNFRSF25Q93038 417 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 HSD3B7Q9H2F3 369 aa19.01■□□□□ 0.63
THSD1-202ENST00000349258 BIN2Q9UBW5 565 aaPredicted RBP19■□□□□ 0.63
THSD1-202ENST00000349258 IL17AQ16552 155 aa19■□□□□ 0.63
THSD1-202ENST00000349258 SHROOM1Q2M3G4 852 aaPredicted RBP19■□□□□ 0.63
THSD1-202ENST00000349258 PAGE5Q96GU1 130 aa19■□□□□ 0.63
THSD1-202ENST00000349258 CDC25BP30305 580 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 SLC16A2P36021 539 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 C16orf86Q6ZW13 317 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 COA7Q96BR5 231 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
THSD1-202ENST00000349258 PCDHA4Q9UN74 947 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 COL24A1Q17RW2 1714 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 CALML3P27482 149 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
THSD1-202ENST00000349258 ZFPM1Q8IX07 1006 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 EEF2KMTQ96G04 330 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 TMEM60Q9H2L4 133 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 ARMCX5Q6P1M9 558 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 C2CD5Q86YS7 1000 aa18.99■□□□□ 0.63
THSD1-202ENST00000349258 FAM237AA0A1B0GTK4 181 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 SMCO2A6NFE2 343 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 GNAQP50148 359 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 CCDC88AQ3V6T2 1871 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 RIOK3O14730 519 aaKnown RBP18.98■□□□□ 0.63
THSD1-202ENST00000349258 NPR1P16066 1061 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 ZNF579Q8NAF0 562 aaKnown RBP18.98■□□□□ 0.63
THSD1-202ENST00000349258 CPLX3Q8WVH0 158 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 FERMT2Q96AC1 680 aa18.98■□□□□ 0.63
THSD1-202ENST00000349258 SLFN14P0C7P3 912 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 ATP2C1P98194 919 aaPredicted RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 CCDC96Q2M329 555 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 NEDD1Q8NHV4 660 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 BPIFA3Q9BQP9 254 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 TMEM260Q9NX78 707 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 PCDHA6Q9UN73 950 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 PCDHA8Q9Y5H6 950 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 CCNT1O60563 726 aaKnown RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 CCZ1BP86790 482 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 CCZ1P86791 482 aaPredicted RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 C15orf52Q6ZUT6 534 aaKnown RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 ZNF831Q5JPB2 1677 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 LY75O60449 1722 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 IKBKBO14920 756 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 TOP1P11387 765 aaKnown RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 CUL4BQ13620 913 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 FAM177A1Q8N128 213 aaPredicted RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 RGS22Q8NE09 1264 aa18.97■□□□□ 0.63
THSD1-202ENST00000349258 RRP36Q96EU6 259 aaKnown RBP18.97■□□□□ 0.63
THSD1-202ENST00000349258 STXBP3O00186 592 aa18.96■□□□□ 0.63
THSD1-202ENST00000349258 CD44P16070 742 aaKnown RBP18.96■□□□□ 0.63
THSD1-202ENST00000349258 KCTD1Q719H9 257 aa18.96■□□□□ 0.63
THSD1-202ENST00000349258 PALM3A6NDB9 673 aaPredicted RBP18.96■□□□□ 0.63
THSD1-202ENST00000349258 ALDH1B1P30837 517 aa18.96■□□□□ 0.63
THSD1-202ENST00000349258 TTBK2Q6IQ55 1244 aa18.96■□□□□ 0.63
THSD1-202ENST00000349258 CDC42EP5Q6NZY7 148 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms