RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
TUBB4B-201ENST00000340384 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
TUBB4B-201ENST00000340384 ZNF112Q9UJU3 913 aa17.52■□□□□ 0.4
TUBB4B-201ENST00000340384 A0A1W2PQ27 194 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 A0A1W2PQ64 194 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 A0A1W2PQD8 194 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 AKR1B1P15121 316 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 JMYQ8N9B5 988 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
TUBB4B-201ENST00000340384 TSPY2A6NKD2 308 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 PRKG1Q13976 671 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 CST9Q5W186 159 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 ADALQ6DHV7 355 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 MKNK2Q9HBH9 465 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 SPTLC2O15270 562 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 U2AF2P26368 475 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 INPP5BP32019 993 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 ANO1Q5XXA6 986 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 FUCA2Q9BTY2 467 aa17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
TUBB4B-201ENST00000340384 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 NMT2O60551 498 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 TOMM70O94826 608 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 GDF11O95390 407 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 CAVIN2O95810 425 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 TFAP4Q01664 338 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 RBM43Q6ZSC3 357 aaKnown RBP17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 MRPS27Q92552 414 aaKnown RBP17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
TUBB4B-201ENST00000340384 IGKV6D-41A0A0C4DH26 115 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 NR1I2O75469 434 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 MMP1P03956 469 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 KIF5BP33176 963 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 DGKHQ86XP1 1220 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 SIAH1Q8IUQ4 282 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.48■□□□□ 0.396e-16■■□□□ 11.6
TUBB4B-201ENST00000340384 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 MAP3K14Q99558 947 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
TUBB4B-201ENST00000340384 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 CAP2P40123 477 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 HS1BP3Q53T59 392 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 DCAF15Q66K64 600 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 FSIP1Q8NA03 581 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 NEDD1Q8NHV4 660 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 TCP11L1Q9NUJ3 509 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 PAPPA2Q9BXP8 1791 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 PPP6R2O75170 966 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 GH2P01242 217 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 TROAPQ12815 778 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 SLC39A14Q15043 492 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 ANKS1AQ92625 1134 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 PDLIM2Q96JY6 352 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.396e-6■□□□□ 8.1
TUBB4B-201ENST00000340384 ZNF408Q9H9D4 720 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 CLIC4Q9Y696 253 aa17.47■□□□□ 0.39
TUBB4B-201ENST00000340384 CTNND1O60716 968 aaKnown RBP17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 CELF2O95319 508 aaKnown RBP17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 NOVP48745 357 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 TYRO3Q06418 890 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 CAMK4Q16566 473 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 ABCB5Q2M3G0 1257 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 CCDC84Q86UT8 332 aaPredicted RBP17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 HOOK2Q96ED9 719 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 CCDC17Q96LX7 622 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 GJB4Q9NTQ9 266 aa17.46■□□□□ 0.39
TUBB4B-201ENST00000340384 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
TUBB4B-201ENST00000340384 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-201ENST00000340384 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
TUBB4B-201ENST00000340384 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms