RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PCDHB15Q9Y5E8 787 aa21.17■□□□□ 0.98
PTPMT1-201ENST00000326656 MINDY4BA8MYZ0 360 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 GPAA1O43292 621 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 CYBAP13498 195 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 RASA1P20936 1047 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 CNGA1P29973 690 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 TMEM132BQ14DG7 1078 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 PPP1R9AQ9ULJ8 1098 aa21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 GREB1LQ9C091 1923 aaPredicted RBP21.16■□□□□ 0.98
PTPMT1-201ENST00000326656 FRMPD3Q5JV73 1810 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 VWA5AO00534 786 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 COBLO75128 1261 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 RIOX2Q8IUF8 465 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 ARRDC4Q8NCT1 418 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 NACAP1Q9BZK3 213 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 NRBP1Q9UHY1 535 aa21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 ZNFX1Q9P2E3 1918 aaKnown RBP21.15■□□□□ 0.98
PTPMT1-201ENST00000326656 DNM1LO00429 736 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 SEPT4O43236 478 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 APPP05067 770 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 STAT3P40763 770 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 TDO2P48775 406 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 TSHZ3Q63HK5 1081 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 TRPV1Q8NER1 839 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 MKL1Q969V6 931 aa21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 DIS3Q9Y2L1 958 aaKnown RBP21.14■□□□□ 0.97
PTPMT1-201ENST00000326656 F5H6K3 240 aa21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 KLRC3Q07444 240 aa21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 IFNL3Q8IZI9 196 aa21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 PI4K2BQ8TCG2 481 aa21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 MAML3Q96JK9 1138 aa21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 ZMYND8Q9ULU4 1186 aaPredicted RBP21.13■□□□□ 0.97
PTPMT1-201ENST00000326656 IGKV6D-41A0A0C4DH26 115 aa21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 KCTD2Q14681 263 aa21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 FAM83BQ5T0W9 1011 aa21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 PRPF38AQ8NAV1 312 aaKnown RBP21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 EPB41L4AQ9HCS5 686 aaPredicted RBP21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 FBXO28Q9NVF7 368 aa21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 COL11A1P12107 1806 aaPredicted RBP21.12■□□□□ 0.97
PTPMT1-201ENST00000326656 M0R2C6 588 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 SLC3A2P08195 630 aaKnown RBP21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 MX1P20591 662 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 PDE4BQ07343 736 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 LRRC26Q2I0M4 334 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 GPR153Q6NV75 609 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 TICAM2Q86XR7 235 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 REPS2Q8NFH8 660 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 MMP19Q99542 508 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 SENP6Q9GZR1 1112 aaPredicted RBP21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 ZBTB47Q9UFB7 747 aaPredicted RBP21.11■□□□□ 0.97
PTPMT1-201ENST00000326656 DNAH12Q6ZR08 3092 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 ATP2A1O14983 1001 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 RAD21O60216 631 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 MAGEA10P43363 369 aaPredicted RBP21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 RRP1P56182 461 aaKnown RBP21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 SAMD1Q6SPF0 538 aaPredicted RBP21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 FSD1Q9BTV5 496 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 TEX13BQ9BXU2 312 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 CLIP2Q9UDT6 1046 aa21.1■□□□□ 0.97
PTPMT1-201ENST00000326656 NDUFB10O96000 172 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 SYN1P17600 705 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 AAMPQ13685 434 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 LRIT3Q3SXY7 679 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 GMCL1P1Q8NEA9 526 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 MTMR4Q9NYA4 1195 aa21.09■□□□□ 0.97
PTPMT1-201ENST00000326656 TTLL1O95922 423 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 FDX1P10109 184 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 ZNF792Q3KQV3 632 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 MSL3Q8N5Y2 521 aaKnown RBP21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 TINF2Q9BSI4 451 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 NAPBQ9H115 298 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 FEM1BQ9UK73 627 aa21.08■□□□□ 0.97
PTPMT1-201ENST00000326656 MYH4Q9Y623 1939 aa21.08■□□□□ 0.96
PTPMT1-201ENST00000326656 KBTBD13C9JR72 458 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 ZBED4O75132 1171 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 HDAC1Q13547 482 aaPredicted RBP21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 TDHQ8IZJ6 230 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 STK11IPQ8N1F8 1099 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 OTUD7AQ8TE49 926 aaPredicted RBP21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 UBE2OQ9C0C9 1292 aaKnown RBP21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
PTPMT1-201ENST00000326656 SALL3Q9BXA9 1300 aa21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 TSPY3P0CV98 308 aa21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 TSPY8P0CW00 308 aa21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 OAZ1P54368 228 aa21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 NUP88Q99567 741 aaPredicted RBP21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 PLXNA1Q9UIW2 1896 aa21.06■□□□□ 0.96
PTPMT1-201ENST00000326656 PRDM1O75626 825 aa21.05■□□□□ 0.96
PTPMT1-201ENST00000326656 PGK2P07205 417 aa21.05■□□□□ 0.96
PTPMT1-201ENST00000326656 PPARAQ07869 468 aa21.05■□□□□ 0.96
PTPMT1-201ENST00000326656 PRAMEF19Q5SWL8 479 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms