RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SRCAPQ6ZRS2 3230 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 A0A087X0B3 334 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 UFL1O94874 794 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 CASQ1P31415 396 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 PPP2R3AQ06190 1150 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 PPP2R2CQ9Y2T4 447 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 NRDCO43847 1150 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 GNG11P61952 73 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 MAN1B1Q9UKM7 699 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 PLCD1P51178 756 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 FUT2Q10981 343 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 TMTC3Q6ZXV5 915 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 EFCC1Q9HA90 598 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 TUBE1Q9UJT0 475 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 WNK3Q9BYP7 1800 aa17.62■□□□□ 0.41
SHROOM1-201ENST00000319854 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 LONRF2Q1L5Z9 754 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 SYMPKQ92797 1274 aaKnown RBP17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 MRFAP1Q9Y605 127 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 TPM1P09493 284 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 PTGDRQ13258 359 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 PLIN2Q99541 437 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 BLZF1Q9H2G9 400 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 EXOC4Q96A65 974 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
SHROOM1-201ENST00000319854 N4BP1O75113 896 aaKnown RBP17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 TSPY3P0CV98 308 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 TSPY8P0CW00 308 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 GPSM2P81274 684 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 PHF20Q9BVI0 1012 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 IRX2Q9BZI1 471 aaPredicted RBP17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 NFE2L3Q9Y4A8 694 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 DOCK2Q92608 1830 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 LTBP4Q8N2S1 1624 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 ACTN2P35609 894 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 TOGARAM2Q6ZUX3 1019 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
SHROOM1-201ENST00000319854 CCP110O43303 1012 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 KIFC2Q96AC6 838 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 PDE11AQ9HCR9 933 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 SAMSN1Q9NSI8 373 aaKnown RBP17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 INTS13Q9NVM9 706 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 CEP131Q9UPN4 1083 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 ARAP2Q8WZ64 1704 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 GRAPQ13588 217 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 SUGCTQ9HAC7 445 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 IL17RBQ9NRM6 502 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 HOOK1Q9UJC3 728 aaKnown RBP17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 MAPK8IP1Q9UQF2 711 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 ANKRD65E5RJM6 399 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 RCSD1Q6JBY9 416 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 HEATR3Q7Z4Q2 680 aa17.59■□□□□ 0.41
SHROOM1-201ENST00000319854 MAP2K7O14733 419 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 SEMA3EO15041 775 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 SCG2P13521 617 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 MCM6Q14566 821 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 VSTM4Q8IW00 320 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 ZNF444Q8N0Y2 327 aaPredicted RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 PSD3Q9NYI0 1048 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 VPS18Q9P253 973 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 ARPP21Q9UBL0 812 aaPredicted RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 PICALMQ13492 652 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 WWC2Q6AWC2 1192 aa17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 CWC15Q9P013 229 aaKnown RBP17.58■□□□□ 0.4
SHROOM1-201ENST00000319854 MDM2Q00987 491 aaPredicted RBP17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 DESI2Q9BSY9 194 aa17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 TRIM37O94972 964 aa17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 KARSQ15046 597 aaKnown RBP17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 SPTY2D1Q68D10 685 aaPredicted RBP17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 RABGGTAQ92696 567 aa17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 ECM29Q5VYK3 1845 aa17.57■□□□□ 0.4
SHROOM1-201ENST00000319854 A0A0U1RQJ8 604 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 IKBKBO14920 756 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ZSCAN12O43309 604 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ACTN4O43707 911 aaKnown RBP17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 BTDP43251 543 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ADKP55263 362 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms