RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 HSPD1P10809 573 aaKnown RBP19.07■□□□□ 0.64
HDDC2-201ENST00000318787 MFAP1P55081 439 aaKnown RBP19.07■□□□□ 0.64
HDDC2-201ENST00000318787 NYAP2Q9P242 653 aa19.07■□□□□ 0.64
HDDC2-201ENST00000318787 GJD2Q9UKL4 321 aa19.07■□□□□ 0.64
HDDC2-201ENST00000318787 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
HDDC2-201ENST00000318787 FGAP02671 866 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 LBX2Q6XYB7 198 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 MTMR7Q9Y216 660 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 F5H6K3 240 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 HIP1O00291 1037 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 TTLL1O95922 423 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 HMGCRP04035 888 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 RGS2P41220 211 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 KLRC3Q07444 240 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 TRIM32Q13049 653 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 NEDD1Q8NHV4 660 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 TRIB2Q92519 343 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 SPATC1LQ9H0A9 340 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 MTMR4Q9NYA4 1195 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 STX8Q9UNK0 236 aa19.06■□□□□ 0.64
HDDC2-201ENST00000318787 ZNFX1Q9P2E3 1918 aaKnown RBP19.05■□□□□ 0.64
HDDC2-201ENST00000318787 NDUFB10O96000 172 aa19.05■□□□□ 0.64
HDDC2-201ENST00000318787 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
HDDC2-201ENST00000318787 TTC22Q5TAA0 569 aa19.05■□□□□ 0.64
HDDC2-201ENST00000318787 DEFB118Q96PH6 123 aa19.05■□□□□ 0.64
HDDC2-201ENST00000318787 MOV10L1Q9BXT6 1211 aaKnown RBP19.05■□□□□ 0.64
HDDC2-201ENST00000318787 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
HDDC2-201ENST00000318787 IGKV6D-41A0A0C4DH26 115 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 NMT2O60551 498 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 GSPT1P15170 499 aaKnown RBP19.04■□□□□ 0.64
HDDC2-201ENST00000318787 CCL14Q16627 93 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 TICAM2Q86XR7 235 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 MB21D1Q8N884 522 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 APBA2Q99767 749 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.04■□□□□ 0.64
HDDC2-201ENST00000318787 PLIN4Q96Q06 1357 aa19.04■□□□□ 0.64
HDDC2-201ENST00000318787 GJB1P08034 283 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 ERCC3P19447 782 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 PTPREP23469 700 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
HDDC2-201ENST00000318787 MAP2K5Q13163 448 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 ALX1Q15699 326 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 MORN1Q5T089 497 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 NKX2-3Q8TAU0 364 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 U2AF1L4Q8WU68 220 aaKnown RBP19.03■□□□□ 0.64
HDDC2-201ENST00000318787 SLF1Q9BQI6 1058 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.646e-7■■■■□ 21.6
HDDC2-201ENST00000318787 ANAPC4Q9UJX5 808 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 PPP1R9AQ9ULJ8 1098 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
HDDC2-201ENST00000318787 TFRCP02786 760 aaKnown RBP19.02■□□□□ 0.64
HDDC2-201ENST00000318787 TMEM132BQ14DG7 1078 aa19.02■□□□□ 0.64
HDDC2-201ENST00000318787 SLFN13Q68D06 897 aa19.02■□□□□ 0.64
HDDC2-201ENST00000318787 DPP9Q86TI2 863 aa19.02■□□□□ 0.64
HDDC2-201ENST00000318787 KIFC2Q96AC6 838 aa19.02■□□□□ 0.64
HDDC2-201ENST00000318787 SHISA4Q96DD7 197 aa19.02■□□□□ 0.64
HDDC2-201ENST00000318787 HMX1Q9NP08 348 aaPredicted RBP19.02■□□□□ 0.64
HDDC2-201ENST00000318787 PLXNA1Q9UIW2 1896 aa19.02■□□□□ 0.63
HDDC2-201ENST00000318787 SLC15A5A6NIM6 579 aa19.01■□□□□ 0.63
HDDC2-201ENST00000318787 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
HDDC2-201ENST00000318787 GJA8P48165 433 aa19.01■□□□□ 0.63
HDDC2-201ENST00000318787 ZNF236Q9UL36 1845 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 VWA5AO00534 786 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 ZNF213O14771 459 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 XRCC5P13010 732 aaKnown RBP19■□□□□ 0.63
HDDC2-201ENST00000318787 ADORA2AP29274 412 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
HDDC2-201ENST00000318787 CPXCR1Q8N123 301 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 ZMYM6O95789 1325 aa19■□□□□ 0.63
HDDC2-201ENST00000318787 ORC4O43929 436 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 SGPL1O95470 568 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 BMP3P12645 472 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 GRB14Q14449 540 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 AKNAD1Q5T1N1 836 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 PRPF38BQ5VTL8 546 aaKnown RBP18.99■□□□□ 0.63
HDDC2-201ENST00000318787 TBC1D10CQ8IV04 446 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 GMCL1P1Q8NEA9 526 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 NPLOC4Q8TAT6 608 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 USP6NLQ92738 828 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 MKL1Q969V6 931 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 MROH8Q9H579 483 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 RPTORQ8N122 1335 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
HDDC2-201ENST00000318787 TMEM232C9JQI7 657 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 MCCP23508 829 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 STAT3P40763 770 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 SLC1A4P43007 532 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
HDDC2-201ENST00000318787 CCDC96Q2M329 555 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 SNRNP48Q6IEG0 339 aaKnown RBP18.98■□□□□ 0.63
HDDC2-201ENST00000318787 RASGRP2Q7LDG7 609 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 PRPF38AQ8NAV1 312 aaKnown RBP18.98■□□□□ 0.63
HDDC2-201ENST00000318787 SHCBP1Q8NEM2 672 aa18.98■□□□□ 0.63
HDDC2-201ENST00000318787 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
HDDC2-201ENST00000318787 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms