RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PLS1Q14651 629 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 ADGRA1Q86SQ6 560 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 ABRAQ8N0Z2 381 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 TSEN34Q9BSV6 310 aaKnown RBP16.14■□□□□ 0.17
SYCN-201ENST00000318438 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.17
SYCN-201ENST00000318438 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
SYCN-201ENST00000318438 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 PLCG2P16885 1265 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 CYP2C18P33260 490 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 COG2Q14746 738 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 KCNA10Q16322 511 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
SYCN-201ENST00000318438 FRAT1Q92837 279 aaPredicted RBP16.13■□□□□ 0.17
SYCN-201ENST00000318438 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 MROH8Q9H579 483 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 CD320Q9NPF0 282 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 MTCH2Q9Y6C9 303 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 SYNRGQ9UMZ2 1314 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
SYCN-201ENST00000318438 MYADML2A6NDP7 307 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 PGK2P07205 417 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
SYCN-201ENST00000318438 FCER1AP12319 257 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 AKR1A1P14550 325 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 PPP4CP60510 307 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
SYCN-201ENST00000318438 KRT40Q6A162 431 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 OTOP2Q7RTS6 562 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 MEIS3Q99687 375 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 HOXC10Q9NYD6 342 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 GBF1Q92538 1859 aa16.12■□□□□ 0.17
SYCN-201ENST00000318438 PRRC2BQ5JSZ5 2229 aaKnown RBP16.11■□□□□ 0.17
SYCN-201ENST00000318438 MOXD2PA6NHM9 499 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 PI4K2BG5E9Z4 385 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 FGBP02675 491 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
SYCN-201ENST00000318438 MCAMP43121 646 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 CDK7P50613 346 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 ABCB5Q2M3G0 1257 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
SYCN-201ENST00000318438 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 TINF2Q9BSI4 451 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 MTIF3Q9H2K0 278 aaKnown RBP16.11■□□□□ 0.17
SYCN-201ENST00000318438 COG5Q9UP83 839 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 AKAP2Q9Y2D5 859 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 MROH7Q68CQ1 1323 aa16.11■□□□□ 0.17
SYCN-201ENST00000318438 GNAI3P08754 354 aa16.1■□□□□ 0.17
SYCN-201ENST00000318438 NHLH1Q02575 133 aa16.1■□□□□ 0.17
SYCN-201ENST00000318438 CERKLQ49MI3 558 aaPredicted RBP16.1■□□□□ 0.17
SYCN-201ENST00000318438 GLT1D1Q96MS3 346 aa16.1■□□□□ 0.17
SYCN-201ENST00000318438 CERS4Q9HA82 394 aa16.1■□□□□ 0.17
SYCN-201ENST00000318438 A0A0G2JMZ2 1700 aa16.1■□□□□ 0.17
SYCN-201ENST00000318438 A0A1W2PRG0 241 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 PRR33A8MZF0 331 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
SYCN-201ENST00000318438 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
SYCN-201ENST00000318438 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
SYCN-201ENST00000318438 FAM126BQ8IXS8 530 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 ATG4CQ96DT6 458 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 MMP19Q99542 508 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 ELP1O95163 1332 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
SYCN-201ENST00000318438 EPOPA6NHQ4 379 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 ARVCFO00192 962 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 SEPT2Q15019 361 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 ZNF792Q3KQV3 632 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 KIAA1755Q5JYT7 1200 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 HLA-CQ95604 372 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 CABP5Q9NP86 173 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 SERPINB13Q9UIV8 391 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 PCDHA11Q9Y5I1 949 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 SLC4A7Q9Y6M7 1214 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
SYCN-201ENST00000318438 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
SYCN-201ENST00000318438 ASGR1P07306 291 aa16.07■□□□□ 0.16
SYCN-201ENST00000318438 POU3F3P20264 500 aaPredicted RBP16.07■□□□□ 0.16
SYCN-201ENST00000318438 DSG3P32926 999 aa16.07■□□□□ 0.16
SYCN-201ENST00000318438 MYO5AQ9Y4I1 1855 aaKnown RBP16.07■□□□□ 0.16
SYCN-201ENST00000318438 TLR3O15455 904 aaKnown RBP16.06■□□□□ 0.16
SYCN-201ENST00000318438 FLOT1O75955 427 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 CA3P07451 260 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
SYCN-201ENST00000318438 SHMT1P34896 483 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms