RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 LRCH3Q96II8 777 aa24.07■■□□□ 1.44
SERF1A-201ENST00000317633 STRBPQ96SI9 672 aaKnown RBP24.07■■□□□ 1.44
SERF1A-201ENST00000317633 COBLO75128 1261 aa24.06■■□□□ 1.44
SERF1A-201ENST00000317633 ZFYP08048 801 aaPredicted RBP24.06■■□□□ 1.44
SERF1A-201ENST00000317633 LRIT3Q3SXY7 679 aa24.06■■□□□ 1.44
SERF1A-201ENST00000317633 MKNK2Q9HBH9 465 aa24.06■■□□□ 1.44
SERF1A-201ENST00000317633 ADAMTS5Q9UNA0 930 aa24.06■■□□□ 1.44
SERF1A-201ENST00000317633 SEPT4O43236 478 aa24.05■■□□□ 1.44
SERF1A-201ENST00000317633 RAD21O60216 631 aa24.05■■□□□ 1.44
SERF1A-201ENST00000317633 TMEM132BQ14DG7 1078 aa24.05■■□□□ 1.44
SERF1A-201ENST00000317633 LRRFIP1Q32MZ4 808 aaKnown RBP24.05■■□□□ 1.44
SERF1A-201ENST00000317633 APPBP2Q92624 585 aa24.05■■□□□ 1.44
SERF1A-201ENST00000317633 GREB1LQ9C091 1923 aaPredicted RBP24.04■■□□□ 1.44
SERF1A-201ENST00000317633 GSG1L2A8MUP6 293 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 KBTBD13C9JR72 458 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 RNF113AO15541 343 aaKnown RBP24.04■■□□□ 1.44
SERF1A-201ENST00000317633 GNAT2P19087 354 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 COPB2P35606 906 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 RIOX2Q8IUF8 465 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 MAML3Q96JK9 1138 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 PPP1R9AQ9ULJ8 1098 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 PLXNA1Q9UIW2 1896 aa24.04■■□□□ 1.44
SERF1A-201ENST00000317633 MINDY4BA8MYZ0 360 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 KCTD2Q14681 263 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 MMP19Q99542 508 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 LBHD1Q9BQE6 289 aaPredicted RBP24.03■■□□□ 1.44
SERF1A-201ENST00000317633 ZNF287Q9HBT7 754 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 FBXO28Q9NVF7 368 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 PRKAG2Q9UGJ0 569 aa24.03■■□□□ 1.44
SERF1A-201ENST00000317633 VWA5AO00534 786 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 STAT3P40763 770 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 ATN1P54259 1190 aaPredicted RBP24.02■■□□□ 1.44
SERF1A-201ENST00000317633 FAM83BQ5T0W9 1011 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 GJC2Q5T442 439 aaPredicted RBP24.02■■□□□ 1.44
SERF1A-201ENST00000317633 OSBP2Q969R2 916 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 NYAP2Q9P242 653 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 NRBP1Q9UHY1 535 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 MYH4Q9Y623 1939 aa24.02■■□□□ 1.44
SERF1A-201ENST00000317633 RASA1P20936 1047 aa24.01■■□□□ 1.43
SERF1A-201ENST00000317633 MDM2Q00987 491 aaPredicted RBP24.01■■□□□ 1.43
SERF1A-201ENST00000317633 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.01■■□□□ 1.43
SERF1A-201ENST00000317633 ROBO3Q96MS0 1386 aa24.01■■□□□ 1.43
SERF1A-201ENST00000317633 SMCHD1A6NHR9 2005 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 GPAA1O43292 621 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 APPP05067 770 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 TDO2P48775 406 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 PRAMEF19Q5SWL8 479 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 ANO1Q5XXA6 986 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 ZNF444Q8N0Y2 327 aaPredicted RBP24■■□□□ 1.43
SERF1A-201ENST00000317633 DIS3Q9Y2L1 958 aaKnown RBP24■■□□□ 1.43
SERF1A-201ENST00000317633 TTC41PQ6P2S7 1318 aa24■■□□□ 1.43
SERF1A-201ENST00000317633 ERC2O15083 957 aa23.99■■□□□ 1.43
SERF1A-201ENST00000317633 MYCNP04198 464 aaPredicted RBP23.99■■□□□ 1.43
SERF1A-201ENST00000317633 RTP1P59025 263 aa23.99■■□□□ 1.43
SERF1A-201ENST00000317633 TSHZ3Q63HK5 1081 aa23.99■■□□□ 1.43
SERF1A-201ENST00000317633 STK11IPQ8N1F8 1099 aa23.99■■□□□ 1.43
SERF1A-201ENST00000317633 SLF1Q9BQI6 1058 aa23.99■■□□□ 1.43
SERF1A-201ENST00000317633 ZNF214Q9UL59 606 aaPredicted RBP23.99■■□□□ 1.43
SERF1A-201ENST00000317633 F5H6K3 240 aa23.98■■□□□ 1.43
SERF1A-201ENST00000317633 KLRC3Q07444 240 aa23.98■■□□□ 1.43
SERF1A-201ENST00000317633 SLC39A5Q6ZMH5 540 aa23.98■■□□□ 1.43
SERF1A-201ENST00000317633 TINF2Q9BSI4 451 aa23.98■■□□□ 1.43
SERF1A-201ENST00000317633 NACAP1Q9BZK3 213 aa23.98■■□□□ 1.43
SERF1A-201ENST00000317633 PATL2C9JE40 543 aaKnown RBP23.97■■□□□ 1.43
SERF1A-201ENST00000317633 PGK2P07205 417 aa23.97■■□□□ 1.43
SERF1A-201ENST00000317633 DEFB123Q8N688 67 aa23.97■■□□□ 1.43
SERF1A-201ENST00000317633 PRPF38AQ8NAV1 312 aaKnown RBP23.97■■□□□ 1.43
SERF1A-201ENST00000317633 REPS2Q8NFH8 660 aa23.97■■□□□ 1.43
SERF1A-201ENST00000317633 TEX13BQ9BXU2 312 aa23.97■■□□□ 1.43
SERF1A-201ENST00000317633 ATP11BQ9Y2G3 1177 aa23.97■■□□□ 1.43
SERF1A-201ENST00000317633 CTDP1Q9Y5B0 961 aaPredicted RBP23.97■■□□□ 1.43
SERF1A-201ENST00000317633 LAMA3Q16787 3333 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 RARBP10826 455 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 LRRC41Q15345 812 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 ZNF792Q3KQV3 632 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 IFNL3Q8IZI9 196 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 EPB41L4AQ9HCS5 686 aaPredicted RBP23.96■■□□□ 1.43
SERF1A-201ENST00000317633 CLIP2Q9UDT6 1046 aa23.96■■□□□ 1.43
SERF1A-201ENST00000317633 M0R2C6 588 aa23.95■■□□□ 1.42
SERF1A-201ENST00000317633 NDUFB10O96000 172 aa23.95■■□□□ 1.42
SERF1A-201ENST00000317633 FAM47AQ5JRC9 791 aa23.95■■□□□ 1.42
SERF1A-201ENST00000317633 NUP88Q99567 741 aaPredicted RBP23.95■■□□□ 1.42
SERF1A-201ENST00000317633 SYNPO2Q9UMS6 1093 aa23.95■■□□□ 1.42
SERF1A-201ENST00000317633 CNPY2Q9Y2B0 182 aa23.95■■□□□ 1.42
SERF1A-201ENST00000317633 IGKV6D-41A0A0C4DH26 115 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 ZBED4O75132 1171 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 SLC3A2P08195 630 aaKnown RBP23.94■■□□□ 1.42
SERF1A-201ENST00000317633 ADCYAP1R1P41586 468 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 PDE4BQ07343 736 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 SNX17Q15036 470 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
SERF1A-201ENST00000317633 RNF180Q86T96 592 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 MSL3Q8N5Y2 521 aaKnown RBP23.94■■□□□ 1.42
SERF1A-201ENST00000317633 SLC17A8Q8NDX2 589 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 MKL1Q969V6 931 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 XPNPEP3Q9NQH7 507 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 DNAH12Q6ZR08 3092 aa23.94■■□□□ 1.42
SERF1A-201ENST00000317633 PRDM1O75626 825 aa23.93■■□□□ 1.42
SERF1A-201ENST00000317633 TTLL1O95922 423 aa23.93■■□□□ 1.42
SERF1A-201ENST00000317633 C1orf53Q5VUE5 145 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms