RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 MAGEC3Q8TD91 643 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 DHTKD1Q96HY7 919 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 NLRP2Q9NX02 1062 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 TULP1O00294 542 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 FGFR1OPO95684 399 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ADD2P35612 726 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 KCNB1Q14721 858 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 E2F4Q16254 413 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CCDC40Q4G0X9 1142 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 TCP11X2Q5H9J9 407 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 C8orf74Q6P047 294 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CCDC121Q6ZUS5 278 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ZNF572Q7Z3I7 529 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CD302Q8IX05 232 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CEP120Q8N960 986 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 PRPF38AQ8NAV1 312 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 BANK1Q8NDB2 785 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ESR2Q92731 530 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 AIFM3Q96NN9 605 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 TAB2Q9NYJ8 693 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 FAM208AQ9UK61 1670 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 RIMBP3CA6NJZ7 1639 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 RIMBP3BA6NNM3 1639 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 RIMBP3Q9UFD9 1639 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 LOC102724159A0A0B4J2E5 919 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 PWP2Q15269 919 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 NCAPH2Q6IBW4 605 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 LRRC59Q96AG4 307 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 PLA2G12BQ9BX93 195 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 RBM28Q9NW13 759 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 SNX12Q9UMY4 172 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC9Q9Y3X0 531 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 TTC26A0AVF1 554 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 PCP11498 1178 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 LONP1P36776 959 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 FOXO4P98177 505 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 CFAP221Q4G0U5 840 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 PPP4R3AQ6IN85 833 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 CERS3Q8IU89 383 aa5.34□□□□□ -1.56
PTPN13-201ENST00000316707 PUS7LQ9H0K6 701 aaKnown RBP5.34□□□□□ -1.56
PTPN13-201ENST00000316707 A0A1W2PQJ5 194 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 RANBP6O60518 1105 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PHKG2P15735 406 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 KCNA6P17658 529 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CALML3P27482 149 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 HNRNPH3P31942 346 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 KRT2P35908 639 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TDO2P48775 406 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CROCCP2Q86T23 111 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 STRBPQ96SI9 672 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 VPS16Q9H269 839 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 LY9Q9HBG7 655 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 FAM217BQ9NTX9 383 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PCDHB6Q9Y5E3 794 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PRAMEF22A3QJZ6 481 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 B4E1Z4 1266 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PRPF3O43395 683 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 IDH1O75874 414 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ZAP70P43403 619 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TNNC1P63316 161 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TBC1D8BQ0IIM8 1120 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TTC38Q5R3I4 469 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 MB21D1Q8N884 522 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CABP5Q9NP86 173 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ABCB11O95342 1321 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ITSN1Q15811 1721 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PATL2C9JE40 543 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 FAM107AO95990 144 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PCCAP05165 728 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PDE6AP16499 860 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 LMNB2Q03252 620 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 SLC39A6Q13433 755 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 NELFBQ8WX92 580 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ZFP91Q96JP5 570 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TRIM47Q96LD4 638 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PURBQ96QR8 312 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PES1O00541 588 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CHGBP05060 677 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TOB1P50616 345 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 RASSF8Q8NHQ8 419 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 SYMPKQ92797 1274 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 ZC3H4Q9UPT8 1303 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PRR29P0C7W0 189 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 GPTP24298 496 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CCT6AP40227 531 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 MTMR3Q13615 1198 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 HSP90AB3PQ58FF7 597 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 TBC1D10CQ8IV04 446 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 SPATA4Q8NEY3 305 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 RNF216Q9NWF9 866 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PLAGL2Q9UPG8 496 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CHD2O14647 1828 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PEAK1Q9H792 1746 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 PARP1P09874 1014 aaKnown RBP5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CCNE1P24864 410 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 CABP4P57796 275 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms