RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 KDM4CQ9H3R0 1056 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 JCADQ9P266 1359 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 MAFGO15525 162 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 OPHN1O60890 802 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 PRDM1O75626 825 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 PCYT1AP49585 367 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 VPS41P49754 854 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 DOK7Q18PE1 504 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 CC2D1AQ6P1N0 951 aaPredicted RBP16.92■□□□□ 0.3
LEMD3-201ENST00000308330 NANOGNBQ7Z5D8 188 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
LEMD3-201ENST00000308330 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 SND1Q7KZF4 910 aaKnown RBP eCLIP16.91■□□□□ 0.3
LEMD3-201ENST00000308330 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
LEMD3-201ENST00000308330 ALG1Q9BT22 464 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
LEMD3-201ENST00000308330 CHMLP26374 656 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 APPBP2Q92624 585 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
LEMD3-201ENST00000308330 GYG1P46976 350 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 GJA8P48165 433 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 NAPAP54920 295 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 CFAP157Q5JU67 520 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
LEMD3-201ENST00000308330 GADD45BO75293 160 aaPredicted RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 ZAP70P43403 619 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 GDAP1L1Q96MZ0 367 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 RHBDL2Q9NX52 303 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 SRP68Q9UHB9 627 aaKnown RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 PAPOLAP51003 745 aaKnown RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 SFSWAPQ12872 951 aaKnown RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 RAB3IPQ96QF0 476 aaPredicted RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 ZC4H2Q9NQZ6 224 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 KRI1Q8N9T8 703 aaKnown RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
LEMD3-201ENST00000308330 KDM5AP29375 1690 aaKnown RBP16.9■□□□□ 0.3
LEMD3-201ENST00000308330 GPAA1O43292 621 aa16.89■□□□□ 0.3
LEMD3-201ENST00000308330 MMP10P09238 476 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 PAX3P23760 479 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 DNA2P51530 1060 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 GREM2Q9H772 168 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
LEMD3-201ENST00000308330 RUFY3Q7L099 469 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 LRRC43Q8N309 656 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 KBTBD3Q8NAB2 608 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
LEMD3-201ENST00000308330 STMN4Q9H169 189 aaPredicted RBP16.89■□□□□ 0.29
LEMD3-201ENST00000308330 ATP2B4P23634 1241 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
LEMD3-201ENST00000308330 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
LEMD3-201ENST00000308330 SKAP2O75563 359 aaPredicted RBP16.88■□□□□ 0.29
LEMD3-201ENST00000308330 ZRANB2O95218 330 aaKnown RBP eCLIP16.88■□□□□ 0.29
LEMD3-201ENST00000308330 CD248Q9HCU0 757 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 PALMDQ9NP74 551 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 PAPOLBQ9NRJ5 636 aaKnown RBP16.88■□□□□ 0.29
LEMD3-201ENST00000308330 PECAM1P16284 738 aaPredicted RBP16.88■□□□□ 0.29
LEMD3-201ENST00000308330 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 SH2D4AQ9H788 454 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 GMNNO75496 209 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 RXRAP19793 462 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 ZNF131P52739 623 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 DHX32Q7L7V1 743 aaKnown RBP16.88■□□□□ 0.29
LEMD3-201ENST00000308330 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 IFT81Q8WYA0 676 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
LEMD3-201ENST00000308330 CASQ2O14958 399 aaPredicted RBP16.87■□□□□ 0.29
LEMD3-201ENST00000308330 CALM1P0DP23 149 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 CALM2P0DP24 149 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 CALM3P0DP25 149 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 VCAM1P19320 739 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 OSBPL1AQ9BXW6 950 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 DRC3Q9H069 523 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 PARP1P09874 1014 aaKnown RBP16.87■□□□□ 0.29
LEMD3-201ENST00000308330 FERP16591 822 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 VSIG1Q86XK7 387 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 ARHGAP18Q8N392 663 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
LEMD3-201ENST00000308330 PFDN4Q9NQP4 134 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 SYNMO15061 1565 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 TMCO5AQ8N6Q1 288 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 LCMT1Q9UIC8 334 aa16.87■□□□□ 0.29
LEMD3-201ENST00000308330 SPDYE3A6NKU9 549 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 B4E1Z4 1266 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 BCAMP50895 628 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 CHRNDQ07001 517 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms