RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
CDH16-201ENST00000299752 GPCPD1Q9NPB8 672 aa16.3■□□□□ 0.2
CDH16-201ENST00000299752 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
CDH16-201ENST00000299752 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 SEPT2Q15019 361 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 GRM4Q14833 912 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 TNIP1Q15025 636 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 CYTH3O43739 400 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 SCG2P13521 617 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 TYRO3Q06418 890 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
CDH16-201ENST00000299752 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
CDH16-201ENST00000299752 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 KRT2P35908 639 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
CDH16-201ENST00000299752 FMR1NBQ8N0W7 255 aaPredicted RBP16.28■□□□□ 0.2
CDH16-201ENST00000299752 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
CDH16-201ENST00000299752 CNTNAP1P78357 1384 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
CDH16-201ENST00000299752 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
CDH16-201ENST00000299752 RILPL1Q5EBL4 403 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
CDH16-201ENST00000299752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDH16-201ENST00000299752 PPP6R2O75170 966 aa16.27■□□□□ 0.2
CDH16-201ENST00000299752 GH2P01242 217 aa16.27■□□□□ 0.2
CDH16-201ENST00000299752 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
CDH16-201ENST00000299752 JMYQ8N9B5 988 aa16.27■□□□□ 0.2
CDH16-201ENST00000299752 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
CDH16-201ENST00000299752 SLC16A2P36021 539 aa16.27■□□□□ 0.19
CDH16-201ENST00000299752 KCTD1Q719H9 257 aa16.27■□□□□ 0.19
CDH16-201ENST00000299752 CLIC6Q96NY7 704 aa16.27■□□□□ 0.19
CDH16-201ENST00000299752 FZD1Q9UP38 647 aa16.27■□□□□ 0.19
CDH16-201ENST00000299752 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.19
CDH16-201ENST00000299752 MYO1BO43795 1136 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 EEF2P13639 858 aaKnown RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDH16-201ENST00000299752 CMA1P23946 247 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 GNAQP50148 359 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 ENTPD3O75355 529 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 TTLL1O95922 423 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 NLRP5P59047 1200 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 NPY5RQ15761 445 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 BRMS1Q9HCU9 246 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 PALM3A6NDB9 673 aaPredicted RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 FZD9O00144 591 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 PFKFB1P16118 471 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 TRIM44Q96DX7 344 aaPredicted RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
CDH16-201ENST00000299752 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 EHD4Q9H223 541 aa16.26■□□□□ 0.19
CDH16-201ENST00000299752 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 CTAGE5O15320 804 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 PDHBP11177 359 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 ANO6Q4KMQ2 910 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 RASA3Q14644 834 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 ZYXQ15942 572 aaKnown RBP16.25■□□□□ 0.19
CDH16-201ENST00000299752 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
CDH16-201ENST00000299752 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
CDH16-201ENST00000299752 ZNF202O95125 648 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 UVSSAQ2YD98 709 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 DLK2Q6UY11 383 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 FOXP4Q8IVH2 680 aaPredicted RBP16.24■□□□□ 0.19
CDH16-201ENST00000299752 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 ICA1Q05084 483 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 PIGSQ96S52 555 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
CDH16-201ENST00000299752 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
CDH16-201ENST00000299752 NOVP48745 357 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 SNAP25P60880 206 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 KRI1Q8N9T8 703 aaKnown RBP16.23■□□□□ 0.19
CDH16-201ENST00000299752 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 PDLIM2Q96JY6 352 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 EPS15P42566 896 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
CDH16-201ENST00000299752 FAM200AQ8TCP9 573 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms