RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.58
GABRB3-201ENST00000299267 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.58
GABRB3-201ENST00000299267 STXBP4Q6ZWJ1 553 aa11.46□□□□□ -0.58
GABRB3-201ENST00000299267 NEK8Q86SG6 692 aa11.46□□□□□ -0.58
GABRB3-201ENST00000299267 SWAP70Q9UH65 585 aa11.46□□□□□ -0.58
GABRB3-201ENST00000299267 SKILP12757 684 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 CCDC181Q5TID7 509 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 TTC14Q96N46 770 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 AMNQ9BXJ7 453 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 ZSWIM4Q9H7M6 989 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 EPB41L4AQ9HCS5 686 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 PCDHB6Q9Y5E3 794 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 DDR1Q08345 913 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 CBX8Q9HC52 389 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 AKR1B10O60218 316 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 GAS7O60861 476 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 CAVIN2O95810 425 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 GPATCH4Q5T3I0 446 aaKnown RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 STAG2Q8N3U4 1231 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 TBCKQ8TEA7 893 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 LY9Q9HBG7 655 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 NOP56O00567 594 aaKnown RBP11.45□□□□□ -0.58
GABRB3-201ENST00000299267 UBXN1Q04323 297 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 SPP2Q13103 211 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 POSTNQ15063 836 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 WRNIP1Q96S55 665 aa11.45□□□□□ -0.58
GABRB3-201ENST00000299267 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 CCP110O43303 1012 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 EEF2P13639 858 aaKnown RBP11.44□□□□□ -0.58
GABRB3-201ENST00000299267 MYL5Q02045 173 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 UVSSAQ2YD98 709 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 GAS2L3Q86XJ1 694 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 RDH13Q8NBN7 331 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 ZHX2Q9Y6X8 837 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 GCOM1H8Y6P7 765 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-201ENST00000299267 POLR2MP0CAP2 368 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 ARHGEF16Q5VV41 709 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 SRGNP10124 158 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 CETN1Q12798 172 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 SUPT20HL1Q3ZLR7 823 aa11.44□□□□□ -0.58
GABRB3-201ENST00000299267 PSMD14O00487 310 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 ZNRF3Q9ULT6 936 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 DNM3Q9UQ16 869 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 PHACTR2O75167 634 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L6PQ6QN14 398 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 CCDC65Q8IXS2 484 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 DDX25Q9UHL0 483 aaKnown RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 B4DLN1 442 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 STAT2P52630 851 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 RASA3Q14644 834 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 FAM83BQ5T0W9 1011 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 DPH6Q7L8W6 267 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 FAM114A1Q8IWE2 563 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 TDRD7Q8NHU6 1098 aaKnown RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 KCNQ5Q9NR82 932 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 MACROD2A1Z1Q3 448 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 MMP1P03956 469 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-201ENST00000299267 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
GABRB3-201ENST00000299267 GLG1Q92896 1179 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms