RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 MYO1BO43795 1136 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 POSTNQ15063 836 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 SUGP1Q8IWZ8 645 aaKnown RBP22.82■■□□□ 1.24
HPS6-201ENST00000299238 MAN1B1Q9UKM7 699 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 SRPRBQ9Y5M8 271 aaKnown RBP22.82■■□□□ 1.24
HPS6-201ENST00000299238 SBF2Q86WG5 1849 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 CBFA2T2O43439 604 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 FUT2Q10981 343 aa22.82■■□□□ 1.24
HPS6-201ENST00000299238 TRMT44Q8IYL2 757 aaKnown RBP22.82■■□□□ 1.24
HPS6-201ENST00000299238 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
HPS6-201ENST00000299238 KIAA1551Q9HCM1 1747 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 SARSP49591 514 aaKnown RBP22.81■■□□□ 1.24
HPS6-201ENST00000299238 PPP2R5BQ15173 497 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 PKN1Q16512 942 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 VSTM4Q8IW00 320 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 SERTAD1Q9UHV2 236 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 LONRF2Q1L5Z9 754 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 SKIDA1Q1XH10 827 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 IFIT1BQ5T764 474 aaKnown RBP22.81■■□□□ 1.24
HPS6-201ENST00000299238 MMS22LQ6ZRQ5 1243 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 ARHGEF1Q92888 912 aaKnown RBP22.81■■□□□ 1.24
HPS6-201ENST00000299238 INTS13Q9NVM9 706 aa22.81■■□□□ 1.24
HPS6-201ENST00000299238 AATFQ9NY61 560 aaKnown RBP eCLIP22.81■■□□□ 1.24
HPS6-201ENST00000299238 HOOK1Q9UJC3 728 aaKnown RBP22.81■■□□□ 1.24
HPS6-201ENST00000299238 FGRP09769 529 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 PCP11498 1178 aaKnown RBP22.8■■□□□ 1.24
HPS6-201ENST00000299238 PRDX5P30044 214 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 MCM6Q14566 821 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 SWT1Q5T5J6 900 aaKnown RBP22.8■■□□□ 1.24
HPS6-201ENST00000299238 CABP5Q9NP86 173 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 PHLPP2Q6ZVD8 1323 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 USP17L12C9JPN9 530 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 USP17L21D6R901 530 aa22.8■■□□□ 1.24
HPS6-201ENST00000299238 ACTN4O43707 911 aaKnown RBP22.79■■□□□ 1.24
HPS6-201ENST00000299238 EVX2Q03828 476 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 FMR1Q06787 632 aaKnown RBP eCLIP22.79■■□□□ 1.24
HPS6-201ENST00000299238 IQCA1Q86XH1 822 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 TM4SF1P30408 202 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 CATIPQ7Z7H3 387 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 VPS54Q9P1Q0 977 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 USP21Q9UK80 565 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 CEP131Q9UPN4 1083 aa22.79■■□□□ 1.24
HPS6-201ENST00000299238 MAP2K2P36507 400 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 MORC3Q14149 939 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 TXNRD3Q86VQ6 643 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 CRNKL1Q9BZJ0 848 aaKnown RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 CSRNP2Q9H175 543 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 FAN1Q9Y2M0 1017 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.78■■□□□ 1.24
HPS6-201ENST00000299238 NRDCO43847 1150 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 AKAP17AQ02040 695 aaKnown RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 LRRC31Q6UY01 552 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 GPR161Q8N6U8 529 aaKnown RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 PHF20Q9BVI0 1012 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 DCP1AQ9NPI6 582 aaPredicted RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 BCCIPQ9P287 314 aaKnown RBP eCLIP22.78■■□□□ 1.24
HPS6-201ENST00000299238 JAG2Q9Y219 1238 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 IRS2Q9Y4H2 1338 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 TOP1P11387 765 aaKnown RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 EARS2Q5JPH6 523 aaKnown RBP22.78■■□□□ 1.24
HPS6-201ENST00000299238 ANKRD20A12PQ8NF67 263 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 SPATA20Q8TB22 786 aa22.78■■□□□ 1.24
HPS6-201ENST00000299238 PLEKHA8P1O95397 391 aa22.77■■□□□ 1.24
HPS6-201ENST00000299238 TPM1P09493 284 aa22.77■■□□□ 1.24
HPS6-201ENST00000299238 ZNF18P17022 549 aa22.77■■□□□ 1.24
HPS6-201ENST00000299238 MLKLQ8NB16 471 aa22.77■■□□□ 1.24
HPS6-201ENST00000299238 BAZ2BQ9UIF8 2168 aaKnown RBP22.77■■□□□ 1.24
HPS6-201ENST00000299238 PRPF3O43395 683 aaKnown RBP22.77■■□□□ 1.23
HPS6-201ENST00000299238 CASP1P29466 404 aa22.77■■□□□ 1.23
HPS6-201ENST00000299238 TROAPQ12815 778 aa22.77■■□□□ 1.23
HPS6-201ENST00000299238 MICALL1Q8N3F8 863 aa22.77■■□□□ 1.23
HPS6-201ENST00000299238 MED15Q96RN5 788 aa22.77■■□□□ 1.23
HPS6-201ENST00000299238 NFE2L3Q9Y4A8 694 aa22.77■■□□□ 1.23
HPS6-201ENST00000299238 ORC4O43929 436 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 KAT2BQ92831 832 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 SRRTQ9BXP5 876 aaKnown RBP22.76■■□□□ 1.23
HPS6-201ENST00000299238 RBM28Q9NW13 759 aaKnown RBP22.76■■□□□ 1.23
HPS6-201ENST00000299238 MAP2K7O14733 419 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 WWC2Q6AWC2 1192 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 SAMD1Q6SPF0 538 aaPredicted RBP22.76■■□□□ 1.23
HPS6-201ENST00000299238 TRIML1Q8N9V2 468 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 SUGCTQ9HAC7 445 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 ATP8A2Q9NTI2 1148 aa22.76■■□□□ 1.23
HPS6-201ENST00000299238 TRIM75PA6NK02 468 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 WNT7AO00755 349 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 PHACTR2O75167 634 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 SLC51AQ86UW1 340 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 ENOX1Q8TC92 643 aaKnown RBP22.75■■□□□ 1.23
HPS6-201ENST00000299238 ZSWIM4Q9H7M6 989 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 RPS6KA5O75582 802 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 DDAH1O94760 285 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 CALM1P0DP23 149 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 CALM2P0DP24 149 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 CALM3P0DP25 149 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 CYP2D6P10635 497 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 XBP1P17861 261 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 KRT2P35908 639 aa22.75■■□□□ 1.23
HPS6-201ENST00000299238 TBX2Q13207 712 aaPredicted RBP22.75■■□□□ 1.23
HPS6-201ENST00000299238 KANK3Q6NY19 840 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms