RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SEC23AQ15436 765 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 TXNRD1Q16881 649 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 TMTC3Q6ZXV5 915 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 PLA2G4DQ86XP0 818 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 FOXP1Q9H334 677 aaPredicted RBP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 RBM28Q9NW13 759 aaKnown RBP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 POLLQ9UGP5 575 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 CCNT1O60563 726 aaKnown RBP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 PPP6R2O75170 966 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 SNAP25P60880 206 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 CBX1P83916 185 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 BPIFA3Q9BQP9 254 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 COL1A1P02452 1464 aaPredicted RBP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 PARP1P09874 1014 aaKnown RBP10.56□□□□□ -0.72
PRDM9-201ENST00000296682 CDK8P49336 464 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 RESP18Q5W5W9 173 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 KCNQ5Q9NR82 932 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 LEMD3Q9Y2U8 911 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 URI1O94763 535 aaPredicted RBP10.56□□□□□ -0.72
PRDM9-201ENST00000296682 PTPREP23469 700 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 RAD51AP2Q09MP3 1159 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 DESI2Q9BSY9 194 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 CTNND2Q9UQB3 1225 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 CNTNAP4Q9C0A0 1308 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 ZYXQ15942 572 aaKnown RBP10.56□□□□□ -0.72
PRDM9-201ENST00000296682 PKN1Q16512 942 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 SLC10A5Q5PT55 438 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.56□□□□□ -0.72
PRDM9-201ENST00000296682 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 NAV1Q8NEY1 1877 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 CDK5RAP3Q96JB5 506 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 ZNF287Q9HBT7 754 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 PARP3Q9Y6F1 533 aa10.56□□□□□ -0.72
PRDM9-201ENST00000296682 FAM170AA1A519 330 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 N4BP3O15049 544 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 PRPF3O43395 683 aaKnown RBP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 TM4SF1P30408 202 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 C12orf60Q5U649 245 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 CEP95Q96GE4 821 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 PIGSQ96S52 555 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 FBXO2Q9UK22 296 aaPredicted RBP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 UTRNP46939 3433 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 TECP42680 631 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 GJA10Q969M2 543 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
PRDM9-201ENST00000296682 NT5C2P49902 561 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
PRDM9-201ENST00000296682 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 CHRNA5P30532 468 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 FILIP1LQ4L180 1135 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
PRDM9-201ENST00000296682 IQUBQ8NA54 791 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 MRFAP1L1Q96HT8 127 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
PRDM9-201ENST00000296682 LZTFL1Q9NQ48 299 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 DACH1Q9UI36 760 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 PCDHAC2Q9Y5I4 1007 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 SEMA3EO15041 775 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 ENOX2Q16206 610 aaKnown RBP10.54□□□□□ -0.72
PRDM9-201ENST00000296682 DYMQ7RTS9 669 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
PRDM9-201ENST00000296682 TMEM260Q9NX78 707 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 SRPRBQ9Y5M8 271 aaKnown RBP10.54□□□□□ -0.72
PRDM9-201ENST00000296682 C10orf71Q711Q0 1435 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 DDR1Q08345 913 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 KIF18AQ8NI77 898 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 POLD4Q9HCU8 107 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
PRDM9-201ENST00000296682 GSDMDP57764 484 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
PRDM9-201ENST00000296682 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 TAB2Q9NYJ8 693 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 A0A087X0B3 334 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 CALML3P27482 149 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 CUL4BQ13620 913 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 ANKRD20A12PQ8NF67 263 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 NUP88Q99567 741 aaPredicted RBP10.53□□□□□ -0.72
PRDM9-201ENST00000296682 GDAQ9Y2T3 454 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms