RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CCDC17Q96LX7 622 aa13.96□□□□□ -0.17
SDE2-201ENST00000272091 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.17
SDE2-201ENST00000272091 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
SDE2-201ENST00000272091 PPP6R2O75170 966 aa13.96□□□□□ -0.18
SDE2-201ENST00000272091 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.18
SDE2-201ENST00000272091 FMR1NBQ8N0W7 255 aaPredicted RBP13.96□□□□□ -0.18
SDE2-201ENST00000272091 FSIP1Q8NA03 581 aa13.96□□□□□ -0.18
SDE2-201ENST00000272091 TSPY26PQ9H489 355 aa13.96□□□□□ -0.18
SDE2-201ENST00000272091 CABP5Q9NP86 173 aa13.96□□□□□ -0.18
SDE2-201ENST00000272091 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.18
SDE2-201ENST00000272091 GDF11O95390 407 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 CSRNP1Q96S65 589 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 SH3GLB2Q9NR46 395 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 SBF1O95248 1867 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 XBP1P17861 261 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 RIOX1Q9H6W3 641 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.95□□□□□ -0.18
SDE2-201ENST00000272091 A0A1B0GVL5 298 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 WNT10BO00744 389 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
SDE2-201ENST00000272091 NDUFA8P51970 172 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
SDE2-201ENST00000272091 FZD9O00144 591 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 SMARCA1P28370 1054 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 ZNF280AP59817 542 aaPredicted RBP13.94□□□□□ -0.18
SDE2-201ENST00000272091 GRIN1Q05586 938 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 FAM160A1Q05DH4 1040 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 SEPT2Q15019 361 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 SHC4Q6S5L8 630 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 MRPS27Q92552 414 aaKnown RBP13.94□□□□□ -0.18
SDE2-201ENST00000272091 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 EEF2P13639 858 aaKnown RBP13.94□□□□□ -0.18
SDE2-201ENST00000272091 RILPL1Q5EBL4 403 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 MKL1Q969V6 931 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 MYOZ2Q9NPC6 264 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 BARHL2Q9NY43 387 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 PIGSQ96S52 555 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 TMEM39BQ9GZU3 492 aa13.94□□□□□ -0.18
SDE2-201ENST00000272091 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 NYAP2Q9P242 653 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
SDE2-201ENST00000272091 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 NLRP5P59047 1200 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 FKBP1CQ5VVH2 108 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 CKAP2LQ8IYA6 745 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
SDE2-201ENST00000272091 TNMDQ9H2S6 317 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 HPSEQ9Y251 543 aa13.93□□□□□ -0.18
SDE2-201ENST00000272091 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 CMA1P23946 247 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 MAP3K11Q16584 847 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 HEATR3Q7Z4Q2 680 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 VEZTQ9HBM0 779 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 PFKFB1P16118 471 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 TNIP1Q15025 636 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 TMEM179Q6ZVK1 233 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 BLIDQ8IZY5 108 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 TMOD2Q9NZR1 351 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
SDE2-201ENST00000272091 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
SDE2-201ENST00000272091 RESP18Q5W5W9 173 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 PCDHA6Q9UN73 950 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 PCDHA8Q9Y5H6 950 aa13.92□□□□□ -0.18
SDE2-201ENST00000272091 GH2P01242 217 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 GMPSP49915 693 aaPredicted RBP13.91□□□□□ -0.18
SDE2-201ENST00000272091 RNF214Q8ND24 703 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 HERC5Q9UII4 1024 aaKnown RBP13.91□□□□□ -0.18
SDE2-201ENST00000272091 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 CCDC73Q6ZRK6 1079 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 PIK3AP1Q6ZUJ8 805 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 FAM83AQ86UY5 434 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.91□□□□□ -0.18
SDE2-201ENST00000272091 MORC2Q9Y6X9 1032 aaPredicted RBP13.91□□□□□ -0.18
SDE2-201ENST00000272091 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
SDE2-201ENST00000272091 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
SDE2-201ENST00000272091 A0A1W2PRG0 241 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 PTPREP23469 700 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
SDE2-201ENST00000272091 ICA1Q05084 483 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms